FFCP PHASE1:Hg19::chr12:122502182..122502193,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZSU1 | |UniProt=Q6ZSU1 | ||
|association_with_transcript=-69bp_to_ENST00000423999_5end | |association_with_transcript=-69bp_to_ENST00000423999_5end | ||
|cluster_id=chr12:122502182..122502193,+ | |||
|description=CAGE_peak_3_at_ENST00000423999_5end | |description=CAGE_peak_3_at_ENST00000423999_5end | ||
|id=chr12:122502182..122502193,+ | |id=chr12:122502182..122502193,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002581;1.96e-12;1!CL:0000669;4.82e-12;4!CL:0000650;7.60e-07;2!CL:1000500;7.60e-07;2!CL:1000618;7.60e-07;2!CL:1001318;7.60e-07;2!CL:0002097;7.60e-07;2!CL:0002575;7.60e-07;2!CL:0002173;7.60e-07;2!CL:0002367;7.60e-07;2!CL:0002253;7.60e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,8.85e-13,1;CL:0000669,4.09e-12,4;CL:0000650,4.83e-07,2;CL:1000500,4.83e-07,2;CL:1000618,4.83e-07,2;CL:1001318,4.83e-07,2;CL:0002173,4.83e-07,2;CL:0002097,7.20e-07,2;CL:0002253,8.06e-07,2;CL:0002367,9.54e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.90e-12!239;DOID:162!1.09e-10!235;DOID:0050686!2.57e-07!137 | |ontology_enrichment_disease=DOID:14566!4.90e-12!239;DOID:162!1.09e-10!235;DOID:0050686!2.57e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:1909;7.60e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.02e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.60e-07;2!UBERON:0002757;7.60e-07;2!UBERON:0010134;7.60e-07;2!UBERON:0003567;7.60e-07;2!UBERON:0003838;7.60e-07;2!UBERON:0003586;7.60e-07;2!UBERON:0005169;7.60e-07;2!UBERON:0005408;7.60e-07;2!UBERON:0002321;7.60e-07;2!UBERON:0005969;7.60e-07;2!UBERON:0005406;7.60e-07;2!UBERON:0005215;7.60e-07;2!UBERON:0002303;7.60e-07;2!UBERON:0001899;7.60e-07;2!UBERON:0002319;7.60e-07;2!UBERON:0003956;7.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,4.83e-07,2;UBERON:0003838,4.83e-07,2;UBERON:0003586,4.83e-07,2;UBERON:0005169,4.83e-07,2;UBERON:0002321,4.83e-07,2;UBERON:0005215,4.83e-07,2;UBERON:0002303,4.83e-07,2;UBERON:0002319,4.83e-07,2;UBERON:0005406,5.11e-07,2;UBERON:0005969,9.54e-07,2;UBERON:0003956,9.54e-07,2 | |||
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| ||
|short_description=p3@ENST00000423999 | |short_description=p3@ENST00000423999 | ||
}} | }} |
Latest revision as of 23:40, 16 September 2015
Short description: | p3@ENST00000423999 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000423999_5end |
Coexpression cluster: | NA |
Association with transcript: | -69bp_to_ENST00000423999_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 8.85e-13 | 1 |
pericyte cell | 4.09e-12 | 4 |
mesangial cell | 4.83e-07 | 2 |
kidney interstitial cell | 4.83e-07 | 2 |
juxtaglomerular complex cell | 4.83e-07 | 2 |
renal interstitial pericyte | 4.83e-07 | 2 |
extraglomerular mesangial cell | 4.83e-07 | 2 |
cortical cell of adrenal gland | 7.20e-07 | 2 |
epithelial cell of large intestine | 8.06e-07 | 2 |
trabecular meshwork cell | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 4.83e-07 | 2 |
abdominal segment connective tissue | 4.83e-07 | 2 |
trunk connective tissue | 4.83e-07 | 2 |
interstitial tissue | 4.83e-07 | 2 |
extraglomerular mesangium | 4.83e-07 | 2 |
kidney interstitium | 4.83e-07 | 2 |
juxtaglomerular apparatus | 4.83e-07 | 2 |
mesangium | 4.83e-07 | 2 |
perirenal fat | 5.11e-07 | 2 |
reticulum trabeculare | 9.54e-07 | 2 |
aqueous drainage system | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.02e-07 | 2 |