FFCP PHASE1:Hg19::chr11:17035711..17035737,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:17035711..17035737,+ to FFCP PHASE1:Hg19::chr11:17035711..17035737,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=8385 | |HGNC=8385 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=166bp_to_ENST00000530490_5end | |||
|cluster_id=chr11:17035711..17035737,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_4_at_OR7E14P_5end | |||
|id=chr11:17035711..17035737,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.93e-14!254;CL:1000507!2.97e-08!12;CL:1000494!2.97e-08!12;CL:0002322!2.16e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.38e-30;5!CL:1000507;3.74e-14;10!CL:1000494;3.74e-14;10!CL:0000182;1.30e-11;12!CL:0002321;4.87e-10;15!CL:1000449;2.30e-09;15!CL:0000239;9.79e-09;3!CL:1000615;9.79e-09;3!CL:0002306;9.79e-09;3!CL:1000497;3.11e-08;17!CL:0002518;3.11e-08;17!CL:0000147;5.44e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.35e-30,5;CL:1000507,2.11e-14,10;CL:1000494,2.11e-14,10;CL:0000182,1.55e-11,12;CL:1000449,1.59e-09,15;CL:0000239,8.41e-09,3;CL:1000615,8.41e-09,3;CL:0002306,8.41e-09,3;CL:1000497,2.25e-08,17;CL:0002518,2.25e-08,17;CL:0000147,5.12e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.74e-08;3 | |||
|ontology_enrichment_disease=DOID:305!1.16e-26!106;DOID:0050687!5.10e-22!143;DOID:299!1.27e-09!25;DOID:162!1.91e-09!235;DOID:14566!8.63e-09!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!5.47e-12!129;UBERON:0004185!5.47e-12!129;UBERON:0003075!1.52e-11!86;UBERON:0007284!1.52e-11!86;UBERON:0000481!1.92e-11!347;UBERON:0000064!9.41e-11!219;UBERON:0002346!1.92e-10!90;UBERON:0007023!2.37e-10!115;UBERON:0001007!3.76e-10!155;UBERON:0001555!3.76e-10!155;UBERON:0007026!3.76e-10!155;UBERON:0005743!5.33e-10!86;UBERON:0000077!6.31e-10!130;UBERON:0004119!1.06e-09!169;UBERON:0000925!1.06e-09!169;UBERON:0006595!1.06e-09!169;UBERON:0001041!1.26e-09!98;UBERON:0000073!1.32e-09!94;UBERON:0001016!1.32e-09!94;UBERON:0003056!1.67e-09!61;UBERON:0000466!3.84e-09!126;UBERON:0000062!5.51e-09!511;UBERON:0001049!9.81e-09!57;UBERON:0005068!9.81e-09!57;UBERON:0006241!9.81e-09!57;UBERON:0007135!9.81e-09!57;UBERON:0000477!1.20e-08!286;UBERON:0005177!1.31e-08!107;UBERON:0001048!1.72e-08!168;UBERON:0000063!1.75e-08!97;UBERON:0000922!2.72e-08!612;UBERON:0009773!2.97e-08!12;UBERON:0001231!2.97e-08!12;UBERON:0004810!2.97e-08!12;UBERON:0001737!7.10e-08!9;UBERON:0001017!7.38e-08!82;UBERON:0000475!1.14e-07!365;UBERON:0000153!1.47e-07!129;UBERON:0007811!1.47e-07!129;UBERON:0000483!1.64e-07!309;UBERON:0000489!1.64e-07!32;UBERON:0004111!1.98e-07!241;UBERON:0004121!2.07e-07!169;UBERON:0000033!2.89e-07!123;UBERON:0000119!3.26e-07!312;UBERON:0000464!3.26e-07!104;UBERON:0006554!6.49e-07!44;UBERON:0000924!6.97e-07!173;UBERON:0006601!6.97e-07!173;UBERON:0000025!7.89e-07!194;UBERON:0008947!8.81e-07!38;UBERON:0003258!8.81e-07!38;UBERON:0000966!8.90e-07!5;UBERON:0005388!8.90e-07!5;UBERON:0001802!8.90e-07!5;UBERON:0002616!9.10e-07!59;UBERON:0000955!9.31e-07!69;UBERON:0006238!9.31e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.74e-14;10!UBERON:0009773;3.74e-14;10!UBERON:0001231;3.74e-14;10!UBERON:0004810;3.74e-14;10!UBERON:0001905;1.13e-12;2!UBERON:0002757;1.13e-12;2!UBERON:0010134;1.13e-12;2!UBERON:0005408;1.13e-12;2!UBERON:0001899;1.13e-12;2!UBERON:0002113;8.80e-11;24!UBERON:0011143;8.80e-11;24!UBERON:0000966;9.36e-11;5!UBERON:0005388;9.36e-11;5!UBERON:0001802;9.36e-11;5!UBERON:0005172;8.26e-10;52!UBERON:0005173;8.26e-10;52!UBERON:0006555;2.30e-09;15!UBERON:0004819;2.30e-09;15!UBERON:0001285;2.30e-09;15!UBERON:0007684;2.30e-09;15!UBERON:0000489;8.97e-09;29!UBERON:0006853;9.79e-09;3!UBERON:0007685;9.79e-09;3!UBERON:0004134;9.79e-09;3!UBERON:0006554;1.88e-08;30!UBERON:0001008;1.88e-08;30!UBERON:0002107;2.99e-07;19!UBERON:0006925;2.99e-07;19!UBERON:0002368;3.70e-07;33!UBERON:0002038;5.60e-07;1!UBERON:0009661;5.60e-07;1!UBERON:0002950;5.60e-07;1!UBERON:0001891;5.60e-07;1!UBERON:0003296;9.46e-07;4!UBERON:0010133;9.46e-07;4!UBERON:0002784;9.46e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.11e-14,10;UBERON:0005172,7.81e-13,54;UBERON:0005173,7.81e-13,54;UBERON:0001905,1.81e-12,2;UBERON:0002757,1.81e-12,2;UBERON:0010134,1.81e-12,2;UBERON:0005408,1.81e-12,2;UBERON:0001899,1.81e-12,2;UBERON:0002417,2.55e-11,60;UBERON:0000916,2.55e-11,60;UBERON:0002113,4.82e-10,26;UBERON:0003918,4.82e-10,26;UBERON:0011143,4.82e-10,26;UBERON:0005095,4.82e-10,26;UBERON:0007687,4.82e-10,26;UBERON:0004211,1.59e-09,15;UBERON:0009773,1.59e-09,15;UBERON:0001231,1.59e-09,15;UBERON:0001285,1.59e-09,15;UBERON:0007684,1.59e-09,15;UBERON:0004208,1.59e-09,15;UBERON:0000966,4.15e-09,6;UBERON:0005388,4.15e-09,6;UBERON:0001802,4.15e-09,6;UBERON:0006555,6.49e-09,16;UBERON:0004819,6.49e-09,16;UBERON:0006853,8.41e-09,3;UBERON:0007685,8.41e-09,3;UBERON:0004134,8.41e-09,3;UBERON:0000489,2.79e-08,31;UBERON:0002107,3.33e-07,19;UBERON:0006925,3.33e-07,19;UBERON:0008836,3.33e-07,19;UBERON:0009569,3.93e-07,112;UBERON:0002368,4.72e-07,35;UBERON:0005177,6.12e-07,101 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.491467873003018,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945348171640679,0.665188192387692,0.263504357079378,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.19644866164613,7.95178609928912,4.88014560051977,2.48786532036889,4.54177531576131,0.36497735907583,0,0,0,0,0,0.473227200159376,0.168584690078102,0.482022059766964,0.220587945464788,0.653638332277218,0.474541238222193,0.269662616320329,0.98110732562673,0.769494313892781,0,0,0,0,0,1.96565443335525,1.18157981336281,0,0.245976877086227,0.343135620597051,0,0,0,0,0,0,0,0.811512834825538,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.184161977871793,0,0,0,1.80479845162965,0.616122696835318,1.56869953835371,1.46139224653261,0.949964660035881,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,1.52925763827023,2.49322802678617,0.223874754722178,0,0,1.53870075069834,0.984043937099117,0.976135183992909,0.515205058238611,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0.384380134730212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0.606802608747567,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0.755798243562828,1.63629892003448,0,0,0.179736702294654,0.716084698702437,0,0.0986434056369336,0,0,0,0,0,0.520855522170466,0.349839999984783,0.724999575434793,0,0,0.236387681767936,0.344743373241465,0,0.173624994933292,0.885741385813839,0,0,0.221158519862449,0,0.219385397153973,0,0.139423744278603,0.153900517007594,0,0.23056390438806,0.0897576444097721,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,0.163232808159148,0.141353071433941,0.649165919226273,0,0.796118080530053,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,1.35291077473043,0.72581733978073,0,0,0.313932918407225,0,0.284609546029793,0,1.04135843001079,0,0.0870592065804026,0,0,0.0967563312890851,0.219267951258557,0,0.387956065953678,0.264768380074501,0.451961481561065,0,0,0.126621591911757,0.195551382734803,0,0.640358984218058,0.19980960958213,0.72045208577053,0.229073192331831,0.171594997861965,0.288109595976299,0,0.707082103850386,0,0.104602846312333,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0.787831823072237,1.31865373409866,1.14586024552114,1.18112977817699,0.0846733320657845,0.795229689809303,0.408610218334727,3.05430982083536,1.65047323916681,0.83088067605837,0,0,0.0607495566580247,0,0.788057072991982,1.62609223218494,0.105600336519406,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0.129282956361551,0.39669780522807,0.342173675768659,1.40963004463334,0.320362237703084,0,0,0,0.395223263795889,0,0,0,0,0.306345576763462,0,0.942324577501406,0,0.122026264901963,0,0,0.887432412294818,0.248385611765534,0.138348634936231,0,0,0,0,0.936669811613763,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0,0,0,0,0,1.02496607435179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0.786329709279482,0,0,0,0,0,0,0.0788617450012534,0.80057074828547,0,0,0.385375350578757,0,0.319267718114302,0,0,0.0691572524642179,0,0,0,0.353909170043221,0.366857197043358,0,0,0,0,0.0752103283492573,0,0.781514011233092,0.785720083444267,0,0.147856086217045,0.202612753855184,0,0,0.126831620387814,0,0.548257766857182,0.496211178389294,0,0.255524855279191,1.07140367175657,2.35398605553177,0,0,0.0887023701626388,0.115233987555779,0,0,0,0.118193840883968,0.444925607568277,0.078493092850514,0.157115589916002,0,0,0,0,1.28657779517981,1.58013611732727,0.929931402945002,0.173858272302579,0,0,0,0,0.860454717640555,0,0,0,0.4582137370881,0,0,0.223710863595585,0.588901401691458,2.31644057466312,0,0,0,0.485710993059139,2.10545517115895,0.795803100645473,0,0.45178432815584,0.549702583727146,0.603851374266694,0.694567422971502,0.218559560503957,0.940634592723046,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0.240724100067505,0,0.458729283404541,1.00337708206016,0,0,0,0.5290268405154,0,0,0,1.00933139868063,0,0,0.203977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| ||
|short_description=p4@OR7E14P | |||
}} | }} |
Latest revision as of 23:46, 16 September 2015
Short description: | p4@OR7E14P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_OR7E14P_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 166bp_to_ENST00000530490_5end |
EntrezGene: | NA |
HGNC: | 8385 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.35e-30 | 5 |
kidney tubule cell | 2.11e-14 | 10 |
nephron tubule epithelial cell | 2.11e-14 | 10 |
hepatocyte | 1.55e-11 | 12 |
epithelial cell of nephron | 1.59e-09 | 15 |
brush border epithelial cell | 8.41e-09 | 3 |
kidney cortex tubule cell | 8.41e-09 | 3 |
epithelial cell of proximal tubule | 8.41e-09 | 3 |
kidney cell | 2.25e-08 | 17 |
kidney epithelial cell | 2.25e-08 | 17 |
pigment cell | 5.12e-07 | 14 |