FFCP PHASE1:Hg19::chr4:185275104..185275133,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=728175 | |EntrezGene=728175 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000317596,NR_040108,uc003iwd.1_5end | |association_with_transcript=0bp_to_ENST00000317596,NR_040108,uc003iwd.1_5end | ||
|cluster_id=chr4:185275104..185275133,- | |||
|coexpression_cluster_id=C156 | |||
|description=CAGE_peak_3_at_LOC728175_5end | |description=CAGE_peak_3_at_LOC728175_5end | ||
|id=chr4:185275104..185275133,- | |id=chr4:185275104..185275133,- | ||
|ontology_enrichment_celltype=CL:0000945!7.28e-33!24;CL:0000826!7.28e-33!24;CL:0000838!7.75e-20!52;CL:0000542!2.05e-19!53;CL:0000051!2.05e-19!53;CL:0000817!2.65e-10!3;CL:0000784!5.74e-10!3;CL:0000946!1.65e-08!1;CL:0000786!1.65e-08!1;CL:0000980!1.65e-08!1;CL:0002087!1.84e-08!119;CL:0002127!2.90e-08!1;CL:0000914!2.90e-08!1;CL:0000911!2.90e-08!1;CL:0000814!2.90e-08!1;CL:0002042!2.90e-08!1;CL:0002039!2.90e-08!1;CL:0002040!2.90e-08!1;CL:0002041!2.90e-08!1;CL:0000236!4.71e-08!14;CL:0002031!5.14e-08!124;CL:0000037!5.33e-08!172;CL:0000566!5.33e-08!172;CL:0000738!5.77e-08!140;CL:0000988!2.22e-07!182;CL:0002032!2.41e-07!165;CL:0000837!2.41e-07!165 | |ontology_enrichment_celltype=CL:0000945!7.28e-33!24;CL:0000826!7.28e-33!24;CL:0000838!7.75e-20!52;CL:0000542!2.05e-19!53;CL:0000051!2.05e-19!53;CL:0000817!2.65e-10!3;CL:0000784!5.74e-10!3;CL:0000946!1.65e-08!1;CL:0000786!1.65e-08!1;CL:0000980!1.65e-08!1;CL:0002087!1.84e-08!119;CL:0002127!2.90e-08!1;CL:0000914!2.90e-08!1;CL:0000911!2.90e-08!1;CL:0000814!2.90e-08!1;CL:0002042!2.90e-08!1;CL:0002039!2.90e-08!1;CL:0002040!2.90e-08!1;CL:0002041!2.90e-08!1;CL:0000236!4.71e-08!14;CL:0002031!5.14e-08!124;CL:0000037!5.33e-08!172;CL:0000566!5.33e-08!172;CL:0000738!5.77e-08!140;CL:0000988!2.22e-07!182;CL:0002032!2.41e-07!165;CL:0000837!2.41e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.62e-47;24!CL:0000946;8.95e-20;1!CL:0000786;8.95e-20;1!CL:0002127;3.57e-19;1!CL:0000911;3.57e-19;1!CL:0000814;3.57e-19;1!CL:0000817;5.62e-19;1!CL:0000542;5.30e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.57e-47,24;CL:0000826,1.57e-47,24;CL:0000838,1.64e-27,52;CL:0000542,5.50e-27,53;CL:0000051,5.50e-27,53;CL:0000817,5.50e-25,3;CL:0000946,8.95e-20,1;CL:0000786,8.95e-20,1;CL:0000980,8.95e-20,1;CL:0002127,3.91e-19,1;CL:0000914,3.91e-19,1;CL:0000911,3.91e-19,1;CL:0000814,3.91e-19,1;CL:0002042,3.91e-19,1;CL:0002039,3.91e-19,1;CL:0002040,3.91e-19,1;CL:0002041,3.91e-19,1;CL:0002087,4.72e-12,115;CL:0002031,1.57e-11,120;CL:0000785,1.43e-10,2;CL:0000955,1.43e-10,2;CL:0000818,1.43e-10,2;CL:0000954,1.43e-10,2;CL:0000816,1.43e-10,2;CL:0000893,2.99e-10,2;CL:0002489,2.99e-10,2;CL:0000809,2.99e-10,2;CL:0000808,2.99e-10,2;CL:0000894,2.99e-10,2;CL:0000806,2.99e-10,2;CL:0000807,2.99e-10,2;CL:0000805,2.99e-10,2;CL:0002425,2.99e-10,2;CL:0000738,4.14e-10,136;CL:0002032,1.91e-08,161;CL:0000837,1.91e-08,161;CL:0000037,4.56e-08,168;CL:0000988,1.27e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;5.30e-12;53!CL:0000954;1.43e-10;2!CL:0002425;2.85e-10;2 | |||
|ontology_enrichment_disease=DOID:2355!2.52e-08!1;DOID:630!2.71e-08!1;DOID:0050177!2.71e-08!1;DOID:0050427!2.71e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:2355;2.47e-19;1!DOID:630;3.57e-19;1!DOID:0050177;3.57e-19;1!DOID:0050427;3.57e-19;1!DOID:74;2.37e-10;2!DOID:0060058;4.11e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,2.71e-19,1;DOID:630,3.25e-19,1;DOID:0050177,3.25e-19,1;DOID:0050427,3.25e-19,1;DOID:74,2.49e-10,2;DOID:0060058,4.19e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.60e-33!7;UBERON:0002106!1.96e-20!3;UBERON:0004854!1.96e-20!3;UBERON:0009034!1.96e-20!3;UBERON:0002095!1.96e-20!3;UBERON:0004782!1.96e-20!3;UBERON:0003281!1.96e-20!3;UBERON:0009664!1.96e-20!3;UBERON:0002296!1.96e-20!3;UBERON:0005602!1.96e-20!3;UBERON:0001179!1.96e-20!3;UBERON:0006293!1.96e-20!3;UBERON:0002370!2.27e-15!4;UBERON:0005058!2.27e-15!4;UBERON:0009113!2.27e-15!4;UBERON:0003295!2.27e-15!4;UBERON:0005562!2.27e-15!4;UBERON:0001042!8.85e-11!10;UBERON:0009145!8.85e-11!10;UBERON:0003351!1.99e-10!6;UBERON:0006562!8.20e-10!11;UBERON:0005057!1.26e-08!26;UBERON:0002372!4.40e-08!1;UBERON:0001961!4.40e-08!1;UBERON:0001744!4.40e-08!1;UBERON:0001735!4.40e-08!1;UBERON:0000945!5.41e-08!8;UBERON:0010039!5.41e-08!8;UBERON:0001154!6.19e-08!1;UBERON:0001153!6.19e-08!1;UBERON:0002336!1.14e-07!1;UBERON:0001018!1.14e-07!1;UBERON:0002473!1.14e-07!1;UBERON:0005340!1.14e-07!1;UBERON:0002316!1.14e-07!1;UBERON:0003544!1.14e-07!1;UBERON:0001020!1.14e-07!1;UBERON:0005970!1.14e-07!1;UBERON:0002437!1.14e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.16e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.85e-11,7;UBERON:0005057,3.85e-11,7;UBERON:0002106,3.16e-07,3;UBERON:0004854,3.16e-07,3;UBERON:0009034,3.16e-07,3;UBERON:0002095,3.16e-07,3;UBERON:0004782,3.16e-07,3;UBERON:0003281,3.16e-07,3;UBERON:0009664,3.16e-07,3;UBERON:0002296,3.16e-07,3;UBERON:0005602,3.16e-07,3;UBERON:0001179,3.16e-07,3;UBERON:0006293,3.16e-07,3 | |||
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|short_description=p3@LOC728175 | |short_description=p3@LOC728175 | ||
}} | }} |
Latest revision as of 01:14, 17 September 2015
Short description: | p3@LOC728175 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC728175_5end |
Coexpression cluster: | C156_plasma_splenic_hereditary_B_large_xeroderma_b |
Association with transcript: | 0bp_to_ENST00000317596, NR_040108, uc003iwd.1_5end |
EntrezGene: | LOC728175 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 3.85e-11 | 7 |
immune organ | 3.85e-11 | 7 |
spleen | 3.16e-07 | 3 |
gastrointestinal system mesentery | 3.16e-07 | 3 |
stomach region | 3.16e-07 | 3 |
mesentery | 3.16e-07 | 3 |
gastrointestinal system serosa | 3.16e-07 | 3 |
mesentery of stomach | 3.16e-07 | 3 |
gut mesentery | 3.16e-07 | 3 |
dorsal mesentery | 3.16e-07 | 3 |
dorsal mesogastrium | 3.16e-07 | 3 |
peritoneal cavity | 3.16e-07 | 3 |
spleen primordium | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 2.71e-19 | 1 |
genetic disease | 3.25e-19 | 1 |
monogenic disease | 3.25e-19 | 1 |
xeroderma pigmentosum | 3.25e-19 | 1 |
hematopoietic system disease | 2.49e-10 | 2 |
lymphoma | 4.19e-08 | 10 |