FFCP PHASE1:Hg19::chr15:27184703..27184727,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2562 | |EntrezGene=2562 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4083 | |HGNC=4083 | ||
|TSSclassifier=strong | |||
|UniProt=F5H7N0 | |UniProt=F5H7N0 | ||
|association_with_transcript=-17bp_to_ENST00000541819,uc001zbb.2_5end | |association_with_transcript=-17bp_to_ENST00000541819,uc001zbb.2_5end | ||
|cluster_id=chr15:27184703..27184727,- | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_16_at_GABRB3_5end | |description=CAGE_peak_16_at_GABRB3_5end | ||
Latest revision as of 01:47, 17 September 2015
| Short description: | p16@GABRB3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_16_at_GABRB3_5end |
| Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
| Association with transcript: | -17bp_to_ENST00000541819, uc001zbb.2_5end |
| EntrezGene: | GABRB3 |
| HGNC: | 4083 |
| UniProt: | F5H7N0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p16@GABRB3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| eye | 4.86e-20 | 21 |
| visual system | 4.86e-20 | 21 |
| retina | 7.67e-18 | 6 |
| photoreceptor array | 7.67e-18 | 6 |
| posterior segment of eyeball | 7.67e-18 | 6 |
| sense organ | 1.03e-17 | 24 |
| sensory system | 1.03e-17 | 24 |
| entire sense organ system | 1.03e-17 | 24 |
Showing 1 to 8 of 8 entries
