FFCP PHASE1:Hg19::chr8:145642221..145642235,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55630 | |EntrezGene=55630 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17129 | |HGNC=17129 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQ16 | |UniProt=E9PQ16 | ||
|association_with_transcript=-18bp_to_ENST00000526658_5end | |association_with_transcript=-18bp_to_ENST00000526658_5end | ||
|cluster_id=chr8:145642221..145642235,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_2_at_SLC39A4_5end | |description=CAGE_peak_2_at_SLC39A4_5end | ||
|id=chr8:145642221..145642235,- | |id=chr8:145642221..145642235,- | ||
|ontology_enrichment_celltype=CL:0000039!1.59e-10!7;CL:0000586!1.59e-10!7;CL:0000066!1.49e-09!254;CL:0002322!6.81e-09!5;CL:1000507!6.53e-08!12;CL:1000494!6.53e-08!12;CL:1000449!2.30e-07!16;CL:0000239!2.40e-07!3;CL:1000615!2.40e-07!3;CL:0002306!2.40e-07!3;CL:0002681!2.76e-07!13;CL:0002584!2.76e-07!13 | |ontology_enrichment_celltype=CL:0000039!1.59e-10!7;CL:0000586!1.59e-10!7;CL:0000066!1.49e-09!254;CL:0002322!6.81e-09!5;CL:1000507!6.53e-08!12;CL:1000494!6.53e-08!12;CL:1000449!2.30e-07!16;CL:0000239!2.40e-07!3;CL:1000615!2.40e-07!3;CL:0002306!2.40e-07!3;CL:0002681!2.76e-07!13;CL:0002584!2.76e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000507;5.37e-14;10!CL:1000494;5.37e-14;10!CL:1000449;2.35e-12;15!CL:0002681;9.72e-12;12!CL:0002584;9.72e-12;12!CL:1000497;8.60e-11;17!CL:0002518;8.60e-11;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,5.84e-14,10;CL:1000494,5.84e-14,10;CL:1000449,2.66e-12,15;CL:0002681,1.09e-11,12;CL:0002584,1.09e-11,12;CL:1000497,9.61e-11,17;CL:0002518,9.61e-11,17;CL:0000066,4.60e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0003104;9.13e-10;31!UBERON:0001041;6.71e-08;30!UBERON:0009117;9.45e-07;10!UBERON:0005564;9.45e-07;10 | |||
|ontology_enrichment_disease=DOID:305!2.41e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3493;2.75e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.75e-09,2;DOID:305,1.70e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.36e-13!169;UBERON:0000925!9.36e-13!169;UBERON:0006595!9.36e-13!169;UBERON:0005631!1.30e-12!14;UBERON:0000158!1.30e-12!14;UBERON:0000466!5.68e-12!126;UBERON:0005177!4.81e-11!107;UBERON:0001007!8.48e-11!155;UBERON:0001555!8.48e-11!155;UBERON:0007026!8.48e-11!155;UBERON:0002113!2.41e-10!27;UBERON:0003918!2.41e-10!27;UBERON:0005095!2.41e-10!27;UBERON:0007687!2.41e-10!27;UBERON:0005172!2.74e-10!55;UBERON:0005173!2.74e-10!55;UBERON:0000464!4.07e-10!104;UBERON:0005409!7.42e-10!35;UBERON:0004921!7.45e-10!129;UBERON:0004185!7.45e-10!129;UBERON:0000489!1.36e-09!32;UBERON:0006554!2.51e-09!44;UBERON:0005911!5.01e-09!82;UBERON:0001008!5.05e-09!45;UBERON:0000160!8.61e-09!27;UBERON:0002417!9.31e-09!61;UBERON:0000916!9.31e-09!61;UBERON:0006555!1.78e-08!17;UBERON:0005103!1.78e-08!17;UBERON:0000083!1.78e-08!17;UBERON:0009201!1.78e-08!17;UBERON:0004819!1.78e-08!17;UBERON:0006553!1.78e-08!17;UBERON:0003074!1.78e-08!17;UBERON:0003060!1.78e-08!17;UBERON:0009569!2.05e-08!113;UBERON:0000478!5.52e-08!24;UBERON:0000077!6.17e-08!130;UBERON:0009773!6.53e-08!12;UBERON:0001231!6.53e-08!12;UBERON:0004810!6.53e-08!12;UBERON:0000080!6.71e-08!18;UBERON:0002120!6.71e-08!18;UBERON:0004875!6.71e-08!18;UBERON:0005721!6.71e-08!18;UBERON:0005754!6.71e-08!18;UBERON:0007297!6.71e-08!18;UBERON:0003886!9.17e-08!63;UBERON:0000058!1.28e-07!26;UBERON:0000305!1.94e-07!7;UBERON:0004211!2.30e-07!16;UBERON:0001285!2.30e-07!16;UBERON:0007684!2.30e-07!16;UBERON:0003220!2.30e-07!16;UBERON:0004208!2.30e-07!16;UBERON:0006853!2.40e-07!3;UBERON:0007685!2.40e-07!3;UBERON:0004134!2.40e-07!3;UBERON:0002553!2.71e-07!70;UBERON:0001225!2.76e-07!13;UBERON:0008987!2.76e-07!13;UBERON:0004876!6.36e-07!20;UBERON:0003124!8.74e-07!7;UBERON:0000059!9.28e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.86e-26;17!UBERON:0005409;1.70e-23;22!UBERON:0002113;2.46e-15;24!UBERON:0011143;2.46e-15;24!UBERON:0004211;5.37e-14;10!UBERON:0009773;5.37e-14;10!UBERON:0001231;5.37e-14;10!UBERON:0004810;5.37e-14;10!UBERON:0002108;5.79e-14;4!UBERON:0004921;7.24e-14;33!UBERON:0000059;5.65e-13;11!UBERON:0000489;2.34e-12;29!UBERON:0006555;2.35e-12;15!UBERON:0004819;2.35e-12;15!UBERON:0001285;2.35e-12;15!UBERON:0007684;2.35e-12;15!UBERON:0006554;6.99e-12;30!UBERON:0001008;6.99e-12;30!UBERON:0001225;9.72e-12;12!UBERON:0008987;9.72e-12;12!UBERON:0001155;1.88e-11;9!UBERON:0009856;7.13e-10;4!UBERON:0005172;9.57e-10;52!UBERON:0005173;9.57e-10;52!UBERON:0001851;2.88e-09;15!UBERON:0000353;2.88e-09;15!UBERON:0002417;7.71e-09;58!UBERON:0000916;7.71e-09;58!UBERON:0004907;1.26e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.12e-26,17;UBERON:0005409,1.58e-20,25;UBERON:0005172,4.57e-14,54;UBERON:0005173,4.57e-14,54;UBERON:0002113,5.77e-14,26;UBERON:0003918,5.77e-14,26;UBERON:0011143,5.77e-14,26;UBERON:0005095,5.77e-14,26;UBERON:0007687,5.77e-14,26;UBERON:0004810,5.84e-14,10;UBERON:0002108,6.50e-14,4;UBERON:0005177,4.23e-13,101;UBERON:0000059,4.65e-13,11;UBERON:0002417,2.56e-12,60;UBERON:0000916,2.56e-12,60;UBERON:0004211,2.66e-12,15;UBERON:0009773,2.66e-12,15;UBERON:0001231,2.66e-12,15;UBERON:0001285,2.66e-12,15;UBERON:0007684,2.66e-12,15;UBERON:0004208,2.66e-12,15;UBERON:0004921,9.66e-12,118;UBERON:0001225,1.09e-11,12;UBERON:0008987,1.09e-11,12;UBERON:0001155,1.72e-11,9;UBERON:0006555,1.79e-11,16;UBERON:0004819,1.79e-11,16;UBERON:0000489,2.11e-11,31;UBERON:0001007,9.46e-11,145;UBERON:0001555,9.46e-11,145;UBERON:0007026,9.46e-11,145;UBERON:0004119,2.79e-10,160;UBERON:0000925,2.79e-10,160;UBERON:0006595,2.79e-10,160;UBERON:0006554,3.63e-10,47;UBERON:0009569,3.79e-10,112;UBERON:0001008,6.65e-10,48;UBERON:0001851,3.16e-09,15;UBERON:0000353,3.16e-09,15;UBERON:0009856,3.26e-09,26;UBERON:0005911,4.09e-08,82;UBERON:0004907,1.04e-07,5;UBERON:0007499,1.65e-07,25;UBERON:0005631,3.46e-07,14;UBERON:0000158,3.46e-07,14 | |||
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| ||
|short_description=p2@SLC39A4 | |short_description=p2@SLC39A4 | ||
}} | }} |
Latest revision as of 01:56, 17 September 2015
Short description: | p2@SLC39A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC39A4_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -18bp_to_ENST00000526658_5end |
EntrezGene: | SLC39A4 |
HGNC: | 17129 |
UniProt: | E9PQ16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 5.84e-14 | 10 |
nephron tubule epithelial cell | 5.84e-14 | 10 |
epithelial cell of nephron | 2.66e-12 | 15 |
kidney cortical cell | 1.09e-11 | 12 |
renal cortical epithelial cell | 1.09e-11 | 12 |
kidney cell | 9.61e-11 | 17 |
kidney epithelial cell | 9.61e-11 | 17 |
epithelial cell | 4.60e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.75e-09 | 2 |
carcinoma | 1.70e-07 | 106 |