FFCP PHASE2:Hg19::chr12:123756321..123756339,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:8099 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:14002 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=14002 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O14519 | ||
|association_with_transcript=347bp_to_ENST00000261692,NM_004642,uc001ueq.2_5end | |association_with_transcript=347bp_to_ENST00000261692,NM_004642,uc001ueq.2_5end | ||
|cluster_id=chr12:123756321..123756339,- | |cluster_id=chr12:123756321..123756339,- | ||
Latest revision as of 02:02, 17 September 2015
| Short description: | p2@CDK2AP1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_CDK2AP1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 347bp_to_ENST00000261692, NM_004642, uc001ueq.2_5end |
| EntrezGene: | CDK2AP1 |
| HGNC: | 14002 |
| UniProt: | O14519 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p2@CDK2AP1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic cell | 8.40e-21 | 250 |
| mesodermal cell | 5.66e-20 | 121 |
| electrically responsive cell | 3.78e-15 | 61 |
| electrically active cell | 3.78e-15 | 61 |
| muscle precursor cell | 3.85e-15 | 58 |
| myoblast | 3.85e-15 | 58 |
| multi-potent skeletal muscle stem cell | 3.85e-15 | 58 |
| muscle cell | 1.02e-13 | 55 |
| fibroblast | 4.66e-13 | 76 |
| smooth muscle cell | 6.09e-11 | 43 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| cell layer | 2.37e-17 | 309 |
| epithelial vesicle | 3.95e-17 | 78 |
| epithelium | 1.43e-16 | 306 |
| vasculature | 1.37e-15 | 78 |
| vascular system | 1.37e-15 | 78 |
| somite | 1.11e-14 | 71 |
| presomitic mesoderm | 1.11e-14 | 71 |
| presumptive segmental plate | 1.11e-14 | 71 |
| dermomyotome | 1.11e-14 | 71 |
| trunk paraxial mesoderm | 1.11e-14 | 71 |
Showing 1 to 10 of 46 entries
