FFCP PHASE1:Hg19::chr2:136578012..136578026,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100507600 | |EntrezGene=100507600 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=251bp_to_ENST00000437007,NR_045486,uc002tuv.1_5end | |association_with_transcript=251bp_to_ENST00000437007,NR_045486,uc002tuv.1_5end | ||
|cluster_id=chr2:136578012..136578026,+ | |||
|coexpression_cluster_id=C580 | |||
|description=CAGE_peak_3_at_LOC100507600_5end | |description=CAGE_peak_3_at_LOC100507600_5end | ||
|id=chr2:136578012..136578026,+ | |id=chr2:136578012..136578026,+ | ||
|ontology_enrichment_celltype=CL:0000084!2.74e-16!25;CL:0000827!2.74e-16!25;CL:0000064!1.89e-12!3;CL:0005012!1.89e-12!3;CL:0000067!1.89e-12!3;CL:0002304!1.89e-12!3;CL:0001024!3.71e-10!1;CL:0002127!8.99e-10!1;CL:0000914!8.99e-10!1;CL:0000911!8.99e-10!1;CL:0000814!8.99e-10!1;CL:0002042!8.99e-10!1;CL:0002039!8.99e-10!1;CL:0002040!8.99e-10!1;CL:0002041!8.99e-10!1;CL:0000838!1.91e-07!52;CL:0000542!2.72e-07!53;CL:0000051!2.72e-07!53 | |ontology_enrichment_celltype=CL:0000084!2.74e-16!25;CL:0000827!2.74e-16!25;CL:0000064!1.89e-12!3;CL:0005012!1.89e-12!3;CL:0000067!1.89e-12!3;CL:0002304!1.89e-12!3;CL:0001024!3.71e-10!1;CL:0002127!8.99e-10!1;CL:0000914!8.99e-10!1;CL:0000911!8.99e-10!1;CL:0000814!8.99e-10!1;CL:0002042!8.99e-10!1;CL:0002039!8.99e-10!1;CL:0002040!8.99e-10!1;CL:0002041!8.99e-10!1;CL:0000838!1.91e-07!52;CL:0000542!2.72e-07!53;CL:0000051!2.72e-07!53 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.12e-12!51;DOID:0060083!1.12e-12!51;DOID:1240!2.62e-10!39;DOID:0060060!4.85e-10!1;DOID:0060061!4.85e-10!1;DOID:8691!4.85e-10!1 | |ontology_enrichment_disease=DOID:2531!1.12e-12!51;DOID:0060083!1.12e-12!51;DOID:1240!2.62e-10!39;DOID:0060060!4.85e-10!1;DOID:0060061!4.85e-10!1;DOID:8691!4.85e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:2531;1.33e-09;51!DOID:0060083;1.33e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.54e-11,51;DOID:0060083,6.54e-11,51;DOID:1240,2.36e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.61e-20!4;UBERON:0005058!1.61e-20!4;UBERON:0009113!1.61e-20!4;UBERON:0003295!1.61e-20!4;UBERON:0005562!1.61e-20!4;UBERON:0004177!3.78e-20!7;UBERON:0000974!2.32e-14!10;UBERON:0003351!7.00e-14!6;UBERON:0001778!1.89e-12!3;UBERON:0001775!1.89e-12!3;UBERON:0000488!1.46e-09!4;UBERON:0003408!1.56e-08!10;UBERON:0001042!1.56e-08!10;UBERON:0009145!1.56e-08!10;UBERON:0006562!8.43e-08!11;UBERON:0009722!8.43e-08!11;UBERON:0007690!8.43e-08!11 | |ontology_enrichment_uberon=UBERON:0002370!1.61e-20!4;UBERON:0005058!1.61e-20!4;UBERON:0009113!1.61e-20!4;UBERON:0003295!1.61e-20!4;UBERON:0005562!1.61e-20!4;UBERON:0004177!3.78e-20!7;UBERON:0000974!2.32e-14!10;UBERON:0003351!7.00e-14!6;UBERON:0001778!1.89e-12!3;UBERON:0001775!1.89e-12!3;UBERON:0000488!1.46e-09!4;UBERON:0003408!1.56e-08!10;UBERON:0001042!1.56e-08!10;UBERON:0009145!1.56e-08!10;UBERON:0006562!8.43e-08!11;UBERON:0009722!8.43e-08!11;UBERON:0007690!8.43e-08!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.72e-66;2!UBERON:0005058;1.72e-66;2!UBERON:0009113;1.72e-66;2!UBERON:0004177;2.22e-27;5!UBERON:0005057;2.22e-27;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.98e-34,4;UBERON:0005058,5.98e-34,4;UBERON:0009113,5.98e-34,4;UBERON:0003295,5.98e-34,4;UBERON:0005562,5.98e-34,4;UBERON:0003351,4.86e-23,6;UBERON:0004177,6.48e-20,7;UBERON:0005057,6.48e-20,7;UBERON:0000974,2.84e-14,10;UBERON:0003408,2.84e-14,10;UBERON:0001042,2.84e-14,10;UBERON:0009145,2.84e-14,10;UBERON:0006562,4.52e-13,11;UBERON:0009722,4.52e-13,11;UBERON:0007690,4.52e-13,11;UBERON:0008814,2.25e-08,18;UBERON:0001557,5.54e-08,19 | |||
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|short_description=p3@LOC100507600 | |short_description=p3@LOC100507600 | ||
}} | }} |
Latest revision as of 02:30, 17 September 2015
Short description: | p3@LOC100507600 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC100507600_5end |
Coexpression cluster: | C580_chronic_thymus_Hodgkin_acute_iPS_vein_Burkitt |
Association with transcript: | 251bp_to_ENST00000437007, NR_045486, uc002tuv.1_5end |
EntrezGene: | LOC100507600 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 5.98e-34 | 4 |
hemolymphoid system gland | 5.98e-34 | 4 |
thymic region | 5.98e-34 | 4 |
pharyngeal gland | 5.98e-34 | 4 |
thymus primordium | 5.98e-34 | 4 |
pharyngeal epithelium | 4.86e-23 | 6 |
hemopoietic organ | 6.48e-20 | 7 |
immune organ | 6.48e-20 | 7 |
neck | 2.84e-14 | 10 |
gland of gut | 2.84e-14 | 10 |
chordate pharynx | 2.84e-14 | 10 |
pharyngeal region of foregut | 2.84e-14 | 10 |
pharynx | 4.52e-13 | 11 |
entire pharyngeal arch endoderm | 4.52e-13 | 11 |
early pharyngeal endoderm | 4.52e-13 | 11 |
pharyngeal arch system | 2.25e-08 | 18 |
upper respiratory tract | 5.54e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.54e-11 | 51 |
immune system cancer | 6.54e-11 | 51 |
leukemia | 2.36e-08 | 39 |