FFCP PHASE1:Hg19::chr15:30114622..30114706,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7082 | |EntrezGene=7082 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11827 | |HGNC=11827 | ||
|TSSclassifier=strong | |||
|UniProt=Q07157,Q6MZU1 | |UniProt=Q07157,Q6MZU1 | ||
|association_with_transcript=0bp_to_ENST00000346128,ENST00000495972,NM_003257,NM_175610,uc001zcr.2,uc001zcs.2_5end | |association_with_transcript=0bp_to_ENST00000346128,ENST00000495972,NM_003257,NM_175610,uc001zcr.2,uc001zcs.2_5end | ||
|cluster_id=chr15:30114622..30114706,- | |||
|description=CAGE_peak_1_at_TJP1_5end | |description=CAGE_peak_1_at_TJP1_5end | ||
|id=chr15:30114622..30114706,- | |id=chr15:30114622..30114706,- | ||
|ontology_enrichment_celltype=CL:0000066!4.80e-21!254;CL:0002321!7.82e-09!248;CL:0000220!2.36e-08!246;CL:0000076!4.01e-08!62;CL:0000223!2.30e-07!59;CL:0002076!2.46e-07!43 | |ontology_enrichment_celltype=CL:0000066!4.80e-21!254;CL:0002321!7.82e-09!248;CL:0000220!2.36e-08!246;CL:0000076!4.01e-08!62;CL:0000223!2.30e-07!59;CL:0002076!2.46e-07!43 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.89e-21,253;CL:0002321,9.80e-09,250;CL:0002076,8.00e-08,42;CL:0000223,9.14e-08,58;CL:0000076,9.24e-08,63 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!1.36e-15!143;DOID:305!4.91e-13!106 | |ontology_enrichment_disease=DOID:0050687!1.36e-15!143;DOID:305!4.91e-13!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.44e-15,143;DOID:305,4.53e-13,106 | |||
|ontology_enrichment_uberon=UBERON:0000468!2.74e-16!659;UBERON:0000481!3.72e-13!347;UBERON:0004119!4.29e-13!169;UBERON:0000925!4.29e-13!169;UBERON:0006595!4.29e-13!169;UBERON:0000467!9.97e-13!625;UBERON:0000480!1.69e-12!626;UBERON:0000475!2.37e-12!365;UBERON:0000119!4.69e-12!312;UBERON:0000483!1.06e-11!309;UBERON:0001007!1.53e-11!155;UBERON:0001555!1.53e-11!155;UBERON:0007026!1.53e-11!155;UBERON:0000466!1.76e-11!126;UBERON:0000922!2.75e-11!612;UBERON:0000062!4.76e-11!511;UBERON:0004111!1.69e-10!241;UBERON:0005156!1.78e-10!59;UBERON:0000990!1.78e-10!59;UBERON:0000464!2.18e-10!104;UBERON:0002100!7.49e-10!216;UBERON:0002050!1.31e-09!605;UBERON:0005423!1.31e-09!605;UBERON:0000923!2.08e-09!604;UBERON:0005291!2.08e-09!604;UBERON:0006598!2.08e-09!604;UBERON:0002532!2.08e-09!604;UBERON:0000477!2.11e-09!286;UBERON:0003104!4.63e-09!238;UBERON:0009142!4.63e-09!238;UBERON:0000077!1.05e-08!130;UBERON:0002553!1.61e-08!70;UBERON:0005177!1.61e-08!107;UBERON:0005911!1.81e-08!82;UBERON:0004921!1.86e-08!129;UBERON:0004185!1.86e-08!129;UBERON:0003133!3.19e-08!48;UBERON:0005157!7.55e-08!51;UBERON:0005153!1.07e-07!37;UBERON:0003886!1.19e-07!63;UBERON:0002323!1.69e-07!46;UBERON:0001048!2.54e-07!168;UBERON:0004458!2.84e-07!49;UBERON:0003101!4.52e-07!22;UBERON:0000079!4.52e-07!22 | |ontology_enrichment_uberon=UBERON:0000468!2.74e-16!659;UBERON:0000481!3.72e-13!347;UBERON:0004119!4.29e-13!169;UBERON:0000925!4.29e-13!169;UBERON:0006595!4.29e-13!169;UBERON:0000467!9.97e-13!625;UBERON:0000480!1.69e-12!626;UBERON:0000475!2.37e-12!365;UBERON:0000119!4.69e-12!312;UBERON:0000483!1.06e-11!309;UBERON:0001007!1.53e-11!155;UBERON:0001555!1.53e-11!155;UBERON:0007026!1.53e-11!155;UBERON:0000466!1.76e-11!126;UBERON:0000922!2.75e-11!612;UBERON:0000062!4.76e-11!511;UBERON:0004111!1.69e-10!241;UBERON:0005156!1.78e-10!59;UBERON:0000990!1.78e-10!59;UBERON:0000464!2.18e-10!104;UBERON:0002100!7.49e-10!216;UBERON:0002050!1.31e-09!605;UBERON:0005423!1.31e-09!605;UBERON:0000923!2.08e-09!604;UBERON:0005291!2.08e-09!604;UBERON:0006598!2.08e-09!604;UBERON:0002532!2.08e-09!604;UBERON:0000477!2.11e-09!286;UBERON:0003104!4.63e-09!238;UBERON:0009142!4.63e-09!238;UBERON:0000077!1.05e-08!130;UBERON:0002553!1.61e-08!70;UBERON:0005177!1.61e-08!107;UBERON:0005911!1.81e-08!82;UBERON:0004921!1.86e-08!129;UBERON:0004185!1.86e-08!129;UBERON:0003133!3.19e-08!48;UBERON:0005157!7.55e-08!51;UBERON:0005153!1.07e-07!37;UBERON:0003886!1.19e-07!63;UBERON:0002323!1.69e-07!46;UBERON:0001048!2.54e-07!168;UBERON:0004458!2.84e-07!49;UBERON:0003101!4.52e-07!22;UBERON:0000079!4.52e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0003101;3.93e-07;22!UBERON:0000079;3.93e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0003101;3.93e-07;22!UBERON:0000079;3.93e-07;22 | ||
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| ||
|short_description=p1@TJP1 | |short_description=p1@TJP1 | ||
}} | }} |
Latest revision as of 02:56, 17 September 2015
Short description: | p1@TJP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TJP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000346128, ENST00000495972, NM_003257, NM_175610, uc001zcr.2, uc001zcs.2_5end |
EntrezGene: | TJP1 |
HGNC: | 11827 |
UniProt: | Q07157Q6MZU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.89e-21 | 253 |
embryonic cell | 9.80e-09 | 250 |
endo-epithelial cell | 8.00e-08 | 42 |
endodermal cell | 9.14e-08 | 58 |
squamous epithelial cell | 9.24e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.19e-11 | 160 |
endoderm | 1.19e-11 | 160 |
presumptive endoderm | 1.19e-11 | 160 |
cell layer | 1.00e-10 | 309 |
reproductive structure | 1.67e-10 | 59 |
reproductive system | 1.67e-10 | 59 |
anatomical conduit | 1.92e-10 | 240 |
epithelium | 2.16e-10 | 306 |
digestive system | 3.67e-10 | 145 |
digestive tract | 3.67e-10 | 145 |
primitive gut | 3.67e-10 | 145 |
trunk | 3.32e-09 | 199 |
embryo | 3.36e-09 | 592 |
organ system subdivision | 4.55e-09 | 223 |
trunk region element | 1.19e-08 | 101 |
endo-epithelium | 1.62e-08 | 82 |
reproductive organ | 3.04e-08 | 48 |
anatomical cavity | 3.06e-08 | 61 |
epithelial bud | 1.03e-07 | 37 |
body cavity | 1.56e-07 | 46 |
body cavity precursor | 2.25e-07 | 54 |
body cavity or lining | 2.63e-07 | 49 |
subdivision of digestive tract | 3.43e-07 | 118 |
male organism | 4.35e-07 | 22 |
male reproductive system | 4.35e-07 | 22 |
developing anatomical structure | 8.44e-07 | 581 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.44e-15 | 143 |
carcinoma | 4.53e-13 | 106 |