FFCP PHASE1:Hg19::chr11:1856142..1856147,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90019 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19264 | |||
|TSSclassifier=strong | |||
|UniProt=F8WBL4 | |||
|association_with_transcript=-73bp_to_ENST00000424556_5end | |||
|cluster_id=chr11:1856142..1856147,+ | |||
|coexpression_cluster_id=C1138 | |||
|description=CAGE_peak_6_at_SYT8_5end | |||
|id=chr11:1856142..1856147,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.60e-17!43;CL:0000223!1.43e-14!59;CL:0002251!2.74e-13!21;CL:0002623!1.39e-10!3;CL:0002541!1.98e-10!3;CL:0002327!1.48e-08!4;CL:0000244!6.47e-08!4;CL:0000731!6.47e-08!4;CL:0000575!1.29e-07!2;CL:0000066!2.27e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002327;1.57e-24;4!CL:0002623;4.60e-15;3!CL:0002541;6.54e-15;3!CL:0002251;4.82e-13;20!CL:0002252;1.19e-11;1!CL:0002076;1.48e-09;42!CL:0000622;2.08e-09;5!CL:0000154;5.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.40e-24,4;CL:0002623,4.60e-15,3;CL:0002541,5.68e-15,3;CL:0002251,5.69e-13,20;CL:0002076,1.46e-11,42;CL:0002252,1.63e-11,1;CL:0000223,1.32e-10,58;CL:0000622,2.08e-09,5;CL:0000154,5.55e-08,6;CL:0000066,4.16e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0006242;5.62e-12;1!CL:0000223;7.43e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000161!1.36e-19!35;UBERON:0004119!1.47e-18!169;UBERON:0000925!1.47e-18!169;UBERON:0006595!1.47e-18!169;UBERON:0000166!1.21e-16!21;UBERON:0000344!2.33e-15!12;UBERON:0000165!4.15e-14!28;UBERON:0000930!4.15e-14!28;UBERON:0001044!1.93e-13!6;UBERON:0003293!1.93e-13!6;UBERON:0003294!1.93e-13!6;UBERON:0010047!1.93e-13!6;UBERON:0000167!1.93e-13!6;UBERON:0000078!3.95e-13!18;UBERON:0000077!7.22e-12!130;UBERON:0001007!1.64e-11!155;UBERON:0001555!1.64e-11!155;UBERON:0007026!1.64e-11!155;UBERON:0001004!3.71e-11!72;UBERON:0003729!1.10e-10!5;UBERON:0001723!1.19e-10!3;UBERON:0001033!1.19e-10!3;UBERON:0010056!1.19e-10!3;UBERON:0000476!1.98e-10!3;UBERON:0000920!1.98e-10!3;UBERON:0000365!2.76e-10!5;UBERON:0001444!5.27e-10!48;UBERON:0004921!1.20e-09!129;UBERON:0004185!1.20e-09!129;UBERON:0003102!1.69e-09!95;UBERON:0005910!1.42e-08!6;UBERON:0001911!1.48e-08!4;UBERON:0005333!1.48e-08!4;UBERON:0008425!1.48e-08!4;UBERON:0005311!1.48e-08!4;UBERON:0003343!3.92e-08!4;UBERON:0004785!3.92e-08!4;UBERON:0002294!5.55e-08!7;UBERON:0001173!5.55e-08!7;UBERON:0004912!5.55e-08!7;UBERON:0003408!6.47e-08!10;UBERON:0003124!1.37e-07!7;UBERON:0005631!1.49e-07!14;UBERON:0000158!1.49e-07!14;UBERON:0004923!1.64e-07!57;UBERON:0001041!4.90e-07!98;UBERON:0003127!6.27e-07!2;UBERON:0002365!6.52e-07!31;UBERON:0002330!6.52e-07!31;UBERON:0001255!9.32e-07!2;UBERON:0001556!9.32e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;1.57e-24;4!UBERON:0002110;6.54e-15;3!UBERON:0003124;6.54e-15;3!UBERON:0000920;6.54e-15;3!UBERON:0002294;4.15e-14;7!UBERON:0001173;4.15e-14;7!UBERON:0004913;5.62e-12;1!UBERON:0003703;5.62e-12;1!UBERON:0001174;5.62e-12;1!UBERON:0004914;5.62e-12;1!UBERON:0007029;1.19e-11;1!UBERON:0003343;1.68e-11;4!UBERON:0004785;1.68e-11;4!UBERON:0000161;4.04e-09;19!UBERON:0000166;4.04e-09;19!UBERON:0002365;3.54e-08;31!UBERON:0002330;3.54e-08;31!UBERON:0001044;5.55e-08;6!UBERON:0003293;5.55e-08;6!UBERON:0003294;5.55e-08;6!UBERON:0010047;5.55e-08;6!UBERON:0003408;5.55e-08;6!UBERON:0000167;5.55e-08;6!UBERON:0000974;5.84e-08;6!UBERON:0001041;2.68e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.40e-24,4;UBERON:0005333,1.40e-24,4;UBERON:0008425,1.40e-24,4;UBERON:0005311,1.40e-24,4;UBERON:0000920,5.68e-15,3;UBERON:0002110,6.54e-15,3;UBERON:0006242,6.54e-15,3;UBERON:0000076,1.32e-12,8;UBERON:0004913,5.62e-12,1;UBERON:0003703,5.62e-12,1;UBERON:0001174,5.62e-12,1;UBERON:0004914,5.62e-12,1;UBERON:0007029,1.07e-11,1;UBERON:0003343,2.02e-11,4;UBERON:0004785,2.02e-11,4;UBERON:0002294,4.23e-11,9;UBERON:0001173,4.23e-11,9;UBERON:0004912,4.23e-11,9;UBERON:0002365,1.77e-08,31;UBERON:0002330,1.77e-08,31;UBERON:0001044,5.55e-08,6;UBERON:0003293,5.55e-08,6;UBERON:0003294,5.55e-08,6;UBERON:0010047,5.55e-08,6;UBERON:0000167,5.55e-08,6;UBERON:0000166,7.17e-08,22;UBERON:0003124,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0152772713595,3.19697332365358,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.330569830721956,0.384380134730212,2.67986696238627,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,1.68471475667626,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0.537063524026827,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,1.5950057986596,0.0915975934018623,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.484945082442097,0,0.451961481561065,0,0,0,1.36885967914362,0,2.98834192635094,0,0,0,0,0,0,9.89914945390541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72961330303897,0,0.366857197043358,1.15525666150338,0,0,0,0,0,0,0,0,2.66140955190681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0.627944742804112,0,0,0,0,0,0,0,0,0,0,0.207216164163037,4.26796192734875,1.38251932362818,0.430227358820278,0,0,0,2.06196181689645,0,0,0,0,0.121917924982269,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0,0,0,0.870866991587845,0.684466602170562,0.740872583160463,0.143444410785353,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p6@SYT8 | |||
}} |
Latest revision as of 02:57, 17 September 2015
Short description: | p6@SYT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SYT8_5end |
Coexpression cluster: | C1138_Mammary_salivary_glassy_gall_Small_oral_throat |
Association with transcript: | -73bp_to_ENST00000424556_5end |
EntrezGene: | SYT8 |
HGNC: | 19264 |
UniProt: | F8WBL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.40e-24 | 4 |
acinar cell of salivary gland | 4.60e-15 | 3 |
chorionic membrane mesenchymal stem cell | 5.68e-15 | 3 |
epithelial cell of alimentary canal | 5.69e-13 | 20 |
endo-epithelial cell | 1.46e-11 | 42 |
epithelial cell of esophagus | 1.63e-11 | 1 |
endodermal cell | 1.32e-10 | 58 |
acinar cell | 2.08e-09 | 5 |
protein secreting cell | 5.55e-08 | 6 |
epithelial cell | 4.16e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.40e-24 | 4 |
mammary bud | 1.40e-24 | 4 |
mammary ridge | 1.40e-24 | 4 |
mammary placode | 1.40e-24 | 4 |
egg chorion | 5.68e-15 | 3 |
gallbladder | 6.54e-15 | 3 |
gall bladder primordium | 6.54e-15 | 3 |
external ectoderm | 1.32e-12 | 8 |
hepatopancreatic ampulla | 5.62e-12 | 1 |
extrahepatic bile duct | 5.62e-12 | 1 |
common bile duct | 5.62e-12 | 1 |
duodenal papilla | 5.62e-12 | 1 |
surface | 1.07e-11 | 1 |
mucosa of oral region | 2.02e-11 | 4 |
respiratory system mucosa | 2.02e-11 | 4 |
biliary system | 4.23e-11 | 9 |
biliary tree | 4.23e-11 | 9 |
biliary bud | 4.23e-11 | 9 |
exocrine gland | 1.77e-08 | 31 |
exocrine system | 1.77e-08 | 31 |
saliva-secreting gland | 5.55e-08 | 6 |
gland of oral region | 5.55e-08 | 6 |
gland of foregut | 5.55e-08 | 6 |
oral gland | 5.55e-08 | 6 |
oral cavity | 5.55e-08 | 6 |
oral opening | 7.17e-08 | 22 |
chorion | 6.39e-07 | 7 |