FFCP PHASE1:Hg19::chr17:6983594..6983619,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=10462 | |EntrezGene=10462 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=16916 | |HGNC=16916 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q8IUN9 | |UniProt=Q8IUN9 | ||
|association_with_transcript=0bp_to_ENST00000254868,ENST00000416562,NM_006344,NM_182906,uc002gej.2,uc002gek.2,uc002gel.2,uc010clv.1_5end | |association_with_transcript=0bp_to_ENST00000254868,ENST00000416562,NM_006344,NM_182906,uc002gej.2,uc002gek.2,uc002gel.2,uc010clv.1_5end | ||
|cluster_id=chr17:6983594..6983619,- | |||
|coexpression_cluster_id=C1560 | |coexpression_cluster_id=C1560 | ||
|description=CAGE_peak_2_at_CLEC10A_5end | |description=CAGE_peak_2_at_CLEC10A_5end | ||
Latest revision as of 03:19, 17 September 2015
| Short description: | p2@CLEC10A |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_CLEC10A_5end |
| Coexpression cluster: | C1560_CD14_Dendritic_Macrophage_dura_Monocytederived_lymph_left |
| Association with transcript: | 0bp_to_ENST00000254868, ENST00000416562, NM_006344, NM_182906, uc002gej.2, uc002gek.2, uc002gel.2, uc010clv.1_5end |
| EntrezGene: | CLEC10A |
| HGNC: | 16916 |
| UniProt: | Q8IUN9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@CLEC10A |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| macrophage dendritic cell progenitor | 2.75e-37 | 61 |
| monopoietic cell | 5.58e-37 | 59 |
| monocyte | 5.58e-37 | 59 |
| monoblast | 5.58e-37 | 59 |
| promonocyte | 5.58e-37 | 59 |
| myeloid leukocyte | 2.25e-33 | 72 |
| granulocyte monocyte progenitor cell | 9.33e-33 | 67 |
| myeloid lineage restricted progenitor cell | 1.11e-31 | 66 |
| defensive cell | 2.63e-31 | 48 |
| phagocyte | 2.63e-31 | 48 |
Showing 1 to 10 of 24 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 4.52e-39 | 98 |
| blood island | 4.52e-39 | 98 |
| hemolymphoid system | 1.59e-38 | 108 |
| bone marrow | 2.58e-27 | 76 |
| immune system | 2.50e-26 | 93 |
| adult organism | 1.89e-24 | 114 |
| bone element | 2.31e-24 | 82 |
| skeletal element | 4.68e-21 | 90 |
| lateral plate mesoderm | 1.37e-19 | 203 |
| skeletal system | 1.07e-17 | 100 |
Showing 1 to 10 of 17 entries
