FFCP PHASE1:Hg19::chr1:25890126..25890172,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26119 | |EntrezGene=26119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18640 | |HGNC=18640 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000474283_5end | |association_with_transcript=1bp_to_ENST00000474283_5end | ||
|cluster_id=chr1:25890126..25890172,+ | |||
|coexpression_cluster_id=C178 | |||
|description=CAGE_peak_9_at_LDLRAP1_5end | |description=CAGE_peak_9_at_LDLRAP1_5end | ||
|id=chr1:25890126..25890172,+ | |id=chr1:25890126..25890172,+ | ||
|ontology_enrichment_celltype=CL:0000625!7.58e-11!11 | |ontology_enrichment_celltype=CL:0000625!7.58e-11!11 | ||
|ontology_enrichment_celltype_v019=CL:0000632;2.74e-12;3!CL:0000327;8.85e-10;15!CL:0000138;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,2.31e-12,3;CL:0000327,8.85e-10,15;CL:0000058,9.49e-07,6;CL:0000138,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0004872;6.79e-20;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.73e-45;3!UBERON:0004177;2.22e-27;5!UBERON:0005057;2.22e-27;5!UBERON:0002390;4.15e-09;32!UBERON:0002075;2.29e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.81e-45,3;UBERON:0004854,7.81e-45,3;UBERON:0009034,7.81e-45,3;UBERON:0002095,7.81e-45,3;UBERON:0004782,7.81e-45,3;UBERON:0003281,7.81e-45,3;UBERON:0009664,7.81e-45,3;UBERON:0002296,7.81e-45,3;UBERON:0005602,7.81e-45,3;UBERON:0001179,7.81e-45,3;UBERON:0006293,7.81e-45,3;UBERON:0004177,6.48e-20,7;UBERON:0005057,6.48e-20,7;UBERON:0000945,1.44e-17,8;UBERON:0010039,1.44e-17,8;UBERON:0004457,4.54e-12,12;UBERON:0000042,4.54e-12,12;UBERON:0003887,4.54e-12,12;UBERON:0002075,2.25e-08,18 | |||
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| ||
|short_description=p9@LDLRAP1 | |short_description=p9@LDLRAP1 | ||
}} | }} |
Latest revision as of 03:35, 17 September 2015
Short description: | p9@LDLRAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LDLRAP1_5end |
Coexpression cluster: | C178_spleen_liver_Hepatocyte_b_lymph_vein_thymus |
Association with transcript: | 1bp_to_ENST00000474283_5end |
EntrezGene: | LDLRAP1 |
HGNC: | 18640 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 2.31e-12 | 3 |
extracellular matrix secreting cell | 8.85e-10 | 15 |
chondroblast | 9.49e-07 | 6 |
chondrocyte | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
spleen | 7.81e-45 | 3 |
gastrointestinal system mesentery | 7.81e-45 | 3 |
stomach region | 7.81e-45 | 3 |
mesentery | 7.81e-45 | 3 |
gastrointestinal system serosa | 7.81e-45 | 3 |
mesentery of stomach | 7.81e-45 | 3 |
gut mesentery | 7.81e-45 | 3 |
dorsal mesentery | 7.81e-45 | 3 |
dorsal mesogastrium | 7.81e-45 | 3 |
peritoneal cavity | 7.81e-45 | 3 |
spleen primordium | 7.81e-45 | 3 |
hemopoietic organ | 6.48e-20 | 7 |
immune organ | 6.48e-20 | 7 |
stomach | 1.44e-17 | 8 |
food storage organ | 1.44e-17 | 8 |
cavity lining | 4.54e-12 | 12 |
serous membrane | 4.54e-12 | 12 |
intraembryonic coelom | 4.54e-12 | 12 |
viscus | 2.25e-08 | 18 |