FFCP PHASE1:Hg19::chr4:186733169..186733170,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8470 | |EntrezGene=8470 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24098 | |HGNC=24098 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000493709_5end | |association_with_transcript=32bp_to_ENST00000493709_5end | ||
|cluster_id=chr4:186733169..186733170,- | |||
|coexpression_cluster_id=C2593 | |coexpression_cluster_id=C2593 | ||
|description=CAGE_peak_29_at_SORBS2_5end | |description=CAGE_peak_29_at_SORBS2_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002174;2.81e-11;1!CL:0000501;2.81e-11;1 | |ontology_enrichment_celltype_v019=CL:0002174;2.81e-11;1!CL:0000501;2.81e-11;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002174,3.28e-11,1;CL:0000501,3.28e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0004140;8.61e-12;1!UBERON:0010226;2.81e-11;1!UBERON:0005062;4.44e-11;4!UBERON:0007284;4.44e-11;4 | |ontology_enrichment_development_v019=UBERON:0004140;8.61e-12;1!UBERON:0010226;2.81e-11;1!UBERON:0005062;4.44e-11;4!UBERON:0007284;4.44e-11;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.14e-36!115;UBERON:0005743!1.82e-22!86;UBERON:0003075!9.96e-22!86;UBERON:0007284!9.96e-22!86;UBERON:0001049!1.22e-20!57;UBERON:0005068!1.22e-20!57;UBERON:0006241!1.22e-20!57;UBERON:0007135!1.22e-20!57;UBERON:0002346!3.65e-20!90;UBERON:0002616!8.80e-20!59;UBERON:0000073!4.45e-19!94;UBERON:0001016!4.45e-19!94;UBERON:0000955!5.53e-19!69;UBERON:0006238!5.53e-19!69;UBERON:0001017!1.55e-18!82;UBERON:0003056!2.10e-18!61;UBERON:0000153!2.28e-18!129;UBERON:0007811!2.28e-18!129;UBERON:0002780!4.57e-18!41;UBERON:0001890!4.57e-18!41;UBERON:0006240!4.57e-18!41;UBERON:0003080!1.88e-17!42;UBERON:0000033!3.88e-17!123;UBERON:0001893!3.03e-14!34;UBERON:0001869!3.89e-14!32;UBERON:0002791!3.21e-13!33;UBERON:0000481!7.42e-13!347;UBERON:0000956!6.14e-12!25;UBERON:0000203!6.14e-12!25;UBERON:0004121!6.16e-12!169;UBERON:0000062!1.44e-11!511;UBERON:0002020!1.74e-11!34;UBERON:0003528!1.74e-11!34;UBERON:0000924!2.52e-11!173;UBERON:0006601!2.52e-11!173;UBERON:0002619!5.04e-11!22;UBERON:0000477!2.79e-10!286;UBERON:0001950!4.66e-09!20;UBERON:0000119!1.84e-08!312;UBERON:0000483!2.85e-08!309;UBERON:0000025!4.09e-08!194;UBERON:0000349!1.01e-07!5;UBERON:0004111!1.02e-07!241;UBERON:0000064!1.90e-07!219;UBERON:0000475!3.57e-07!365;UBERON:0000922!3.87e-07!612;UBERON:0000467!5.89e-07!625;UBERON:0000480!6.74e-07!626 | |ontology_enrichment_uberon=UBERON:0007023!4.14e-36!115;UBERON:0005743!1.82e-22!86;UBERON:0003075!9.96e-22!86;UBERON:0007284!9.96e-22!86;UBERON:0001049!1.22e-20!57;UBERON:0005068!1.22e-20!57;UBERON:0006241!1.22e-20!57;UBERON:0007135!1.22e-20!57;UBERON:0002346!3.65e-20!90;UBERON:0002616!8.80e-20!59;UBERON:0000073!4.45e-19!94;UBERON:0001016!4.45e-19!94;UBERON:0000955!5.53e-19!69;UBERON:0006238!5.53e-19!69;UBERON:0001017!1.55e-18!82;UBERON:0003056!2.10e-18!61;UBERON:0000153!2.28e-18!129;UBERON:0007811!2.28e-18!129;UBERON:0002780!4.57e-18!41;UBERON:0001890!4.57e-18!41;UBERON:0006240!4.57e-18!41;UBERON:0003080!1.88e-17!42;UBERON:0000033!3.88e-17!123;UBERON:0001893!3.03e-14!34;UBERON:0001869!3.89e-14!32;UBERON:0002791!3.21e-13!33;UBERON:0000481!7.42e-13!347;UBERON:0000956!6.14e-12!25;UBERON:0000203!6.14e-12!25;UBERON:0004121!6.16e-12!169;UBERON:0000062!1.44e-11!511;UBERON:0002020!1.74e-11!34;UBERON:0003528!1.74e-11!34;UBERON:0000924!2.52e-11!173;UBERON:0006601!2.52e-11!173;UBERON:0002619!5.04e-11!22;UBERON:0000477!2.79e-10!286;UBERON:0001950!4.66e-09!20;UBERON:0000119!1.84e-08!312;UBERON:0000483!2.85e-08!309;UBERON:0000025!4.09e-08!194;UBERON:0000349!1.01e-07!5;UBERON:0004111!1.02e-07!241;UBERON:0000064!1.90e-07!219;UBERON:0000475!3.57e-07!365;UBERON:0000922!3.87e-07!612;UBERON:0000467!5.89e-07!625;UBERON:0000480!6.74e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.85e-14;3!UBERON:0000946;1.85e-14;3!UBERON:0007100;3.41e-14;25!UBERON:0002146;1.12e-11;1!UBERON:0005623;1.12e-11;1!UBERON:0002022;2.81e-11;1!UBERON:0002084;2.81e-11;1!UBERON:0002135;2.81e-11;1!UBERON:0002082;2.81e-11;1!UBERON:0000948;1.38e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0003978;1.85e-14;3!UBERON:0000946;1.85e-14;3!UBERON:0007100;3.41e-14;25!UBERON:0002146;1.12e-11;1!UBERON:0005623;1.12e-11;1!UBERON:0002022;2.81e-11;1!UBERON:0002084;2.81e-11;1!UBERON:0002135;2.81e-11;1!UBERON:0002082;2.81e-11;1!UBERON:0000948;1.38e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.62e-14,3;UBERON:0009751,1.62e-14,3;UBERON:0000946,1.62e-14,3;UBERON:0002523,1.62e-14,3;UBERON:0005983,1.62e-14,3;UBERON:0002165,1.62e-14,3;UBERON:0002062,1.62e-14,3;UBERON:0007280,1.62e-14,3;UBERON:0007100,3.94e-13,27;UBERON:0002146,1.06e-11,1;UBERON:0005623,1.06e-11,1;UBERON:0002135,2.42e-11,1;UBERON:0002084,2.96e-11,1;UBERON:0002082,2.96e-11,1;UBERON:0010226,2.96e-11,1;UBERON:0002022,5.43e-11,1;UBERON:0000948,5.65e-07,24;UBERON:0005498,5.65e-07,24;UBERON:0004140,5.65e-07,24;UBERON:0009881,5.65e-07,24;UBERON:0004141,5.65e-07,24;UBERON:0003084,5.65e-07,24;UBERON:0007005,5.65e-07,24;UBERON:0004139,5.65e-07,24;UBERON:0004291,5.65e-07,24 | |||
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|short_description=p29@SORBS2 | |short_description=p29@SORBS2 | ||
}} | }} |
Latest revision as of 04:07, 17 September 2015
Short description: | p29@SORBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_SORBS2_5end |
Coexpression cluster: | C2593_heart_thyroid_retina_left_umbilical_smooth_pituitary |
Association with transcript: | 32bp_to_ENST00000493709_5end |
EntrezGene: | SORBS2 |
HGNC: | 24098 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 3.28e-11 | 1 |
granulosa cell | 3.28e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
valve | 1.62e-14 | 3 |
cardiac mesenchyme | 1.62e-14 | 3 |
cardial valve | 1.62e-14 | 3 |
tunica intima | 1.62e-14 | 3 |
heart layer | 1.62e-14 | 3 |
endocardium | 1.62e-14 | 3 |
endocardial cushion | 1.62e-14 | 3 |
presumptive endocardium | 1.62e-14 | 3 |
primary circulatory organ | 3.94e-13 | 27 |
pulmonary valve | 1.06e-11 | 1 |
semi-lunar valve | 1.06e-11 | 1 |
mitral valve | 2.42e-11 | 1 |
heart left ventricle | 2.96e-11 | 1 |
cardiac ventricle | 2.96e-11 | 1 |
future cardiac ventricle | 2.96e-11 | 1 |
insula | 5.43e-11 | 1 |
heart | 5.65e-07 | 24 |
primitive heart tube | 5.65e-07 | 24 |
primary heart field | 5.65e-07 | 24 |
anterior lateral plate mesoderm | 5.65e-07 | 24 |
heart tube | 5.65e-07 | 24 |
heart primordium | 5.65e-07 | 24 |
cardiac mesoderm | 5.65e-07 | 24 |
cardiogenic plate | 5.65e-07 | 24 |
heart rudiment | 5.65e-07 | 24 |