FFCP PHASE1:Hg19::chr16:57653997..57654022,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:57653997..57654022,+ to FFCP PHASE1:Hg19::chr16:57653997..57654022,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9289 | |EntrezGene=9289 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4512 | |HGNC=4512 | ||
|TSSclassifier=strong | |||
|UniProt=B3KQN7,B3KQV4,Q9Y653 | |UniProt=B3KQN7,B3KQV4,Q9Y653 | ||
|association_with_transcript=87bp_to_NM_001145770,NM_005682,uc002emb.2,uc002emc.2_5end | |||
|cluster_id=chr16:57653997..57654022,+ | |||
|coexpression_cluster_id=C2379 | |||
|description=CAGE_peak_7_at_GPR56_5end | |||
|id=chr16:57653997..57654022,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.01e-36!254;CL:0002076!3.72e-24!43;CL:0000223!6.55e-22!59;CL:0002251!1.44e-11!21;CL:0002368!2.39e-11!13;CL:0002159!1.53e-08!13;CL:0002202!2.26e-07!9;CL:0002632!2.26e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.04e-20;42!CL:0002368;4.33e-13;13!CL:0002251;4.64e-13;20!CL:0002202;1.99e-08;9!CL:0002632;1.99e-08;9!CL:0002159;9.90e-08;14!CL:1000507;2.78e-07;10!CL:1000494;2.78e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.45e-31,253;CL:0002076,1.02e-26,42;CL:0000223,8.52e-24,58;CL:0002251,4.44e-13,20;CL:0002368,4.44e-13,13;CL:0002202,1.94e-08,9;CL:0002632,1.94e-08,9;CL:0002159,1.02e-07,14;CL:1000507,2.78e-07,10;CL:1000494,2.78e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000223;1.41e-12;58!UBERON:0006595;3.16e-07;86 | |||
|ontology_enrichment_disease=DOID:305!2.99e-23!106;DOID:0050687!6.25e-16!143;DOID:1749!1.12e-10!14;DOID:299!8.58e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.33e-12;14!DOID:299;2.14e-08;25!DOID:305;9.23e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.22e-17,106;DOID:1749,2.75e-12,14;DOID:0050687,1.28e-11,143;DOID:299,2.24e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.45e-33!169;UBERON:0000925!5.45e-33!169;UBERON:0006595!5.45e-33!169;UBERON:0001007!6.13e-25!155;UBERON:0001555!6.13e-25!155;UBERON:0007026!6.13e-25!155;UBERON:0004921!1.42e-22!129;UBERON:0004185!1.42e-22!129;UBERON:0000077!4.37e-22!130;UBERON:0001004!1.68e-21!72;UBERON:0001041!1.15e-17!98;UBERON:0000466!2.75e-16!126;UBERON:0000065!9.87e-16!53;UBERON:0000464!1.13e-15!104;UBERON:0005911!5.93e-13!82;UBERON:0000062!2.22e-12!511;UBERON:0008947!6.19e-12!38;UBERON:0003258!6.19e-12!38;UBERON:0005177!2.16e-11!107;UBERON:0000072!2.37e-11!46;UBERON:0001008!1.90e-10!45;UBERON:0000161!2.42e-10!35;UBERON:0005153!4.39e-10!37;UBERON:0006554!4.74e-10!44;UBERON:0009569!8.80e-10!113;UBERON:0003104!2.71e-09!238;UBERON:0009142!2.71e-09!238;UBERON:0005178!3.24e-09!34;UBERON:0002224!3.24e-09!34;UBERON:0000166!3.40e-09!21;UBERON:0004175!4.14e-09!25;UBERON:0005631!8.83e-09!14;UBERON:0000158!8.83e-09!14;UBERON:0005181!9.26e-09!35;UBERON:0005156!1.02e-08!59;UBERON:0000990!1.02e-08!59;UBERON:0003133!3.80e-08!48;UBERON:0002553!5.05e-08!70;UBERON:0000468!5.94e-08!659;UBERON:0003100!1.03e-07!41;UBERON:0000922!1.03e-07!612;UBERON:0001048!1.17e-07!168;UBERON:0000058!1.49e-07!26;UBERON:0000064!1.53e-07!219;UBERON:0000467!1.91e-07!625;UBERON:0002530!2.19e-07!59;UBERON:0000480!2.31e-07!626;UBERON:0000915!3.28e-07!52;UBERON:0000344!4.29e-07!12;UBERON:0002048!4.34e-07!22;UBERON:0000117!4.34e-07!22;UBERON:0000171!4.34e-07!22;UBERON:0000170!4.34e-07!22;UBERON:0005597!4.34e-07!22;UBERON:0000118!4.34e-07!22;UBERON:0003124!4.74e-07!7;UBERON:0005157!5.58e-07!51;UBERON:0005795!7.84e-07!22;UBERON:0003975!8.56e-07!22;UBERON:0002365!9.17e-07!31;UBERON:0002330!9.17e-07!31;UBERON:0000165!9.86e-07!28;UBERON:0000930!9.86e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;7.80e-11;33!UBERON:0006554;9.99e-11;30!UBERON:0001008;9.99e-11;30!UBERON:0000161;1.77e-09;19!UBERON:0000166;1.77e-09;19!UBERON:0005911;8.92e-09;36!UBERON:0001041;1.32e-08;14!UBERON:0005178;2.42e-08;34!UBERON:0002224;2.42e-08;34!UBERON:0004807;2.61e-08;22!UBERON:0000165;3.77e-08;28!UBERON:0001555;5.18e-08;54!UBERON:0005181;1.40e-07;35!UBERON:0000365;2.76e-07;5!UBERON:0004211;2.78e-07;10!UBERON:0009773;2.78e-07;10!UBERON:0001231;2.78e-07;10!UBERON:0004810;2.78e-07;10!UBERON:0000344;3.49e-07;20!UBERON:0001004;3.95e-07;65!UBERON:0001044;4.78e-07;6!UBERON:0003293;4.78e-07;6!UBERON:0003294;4.78e-07;6!UBERON:0010047;4.78e-07;6!UBERON:0003408;4.78e-07;6!UBERON:0000167;4.78e-07;6!UBERON:0007196;7.89e-07;15!UBERON:0001558;7.89e-07;15!UBERON:0000974;9.05e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.48e-27,160;UBERON:0000925,4.48e-27,160;UBERON:0006595,4.48e-27,160;UBERON:0001007,3.75e-19,145;UBERON:0001555,3.75e-19,145;UBERON:0007026,3.75e-19,145;UBERON:0004921,4.11e-16,118;UBERON:0001008,2.24e-15,48;UBERON:0006554,6.96e-15,47;UBERON:0001004,2.40e-14,74;UBERON:0005177,1.18e-13,101;UBERON:0005911,1.43e-11,82;UBERON:0001041,5.52e-11,87;UBERON:0000161,5.62e-11,36;UBERON:0009569,9.71e-11,112;UBERON:0005631,3.74e-10,14;UBERON:0000158,3.74e-10,14;UBERON:0000166,4.00e-10,22;UBERON:0005153,1.44e-09,37;UBERON:0005178,2.18e-09,34;UBERON:0002224,2.18e-09,34;UBERON:0005181,5.91e-09,35;UBERON:0000065,1.59e-08,54;UBERON:0005157,4.02e-08,47;UBERON:0003124,5.72e-08,7;UBERON:0000915,7.11e-08,52;UBERON:0004175,7.94e-08,25;UBERON:0000165,9.76e-08,29;UBERON:0000930,9.76e-08,29;UBERON:0002113,1.12e-07,26;UBERON:0003918,1.12e-07,26;UBERON:0011143,1.12e-07,26;UBERON:0005095,1.12e-07,26;UBERON:0007687,1.12e-07,26;UBERON:0000489,1.80e-07,31;UBERON:0000365,2.54e-07,5;UBERON:0004810,2.78e-07,10;UBERON:0000344,3.32e-07,20;UBERON:0001044,4.57e-07,6;UBERON:0003293,4.57e-07,6;UBERON:0003294,4.57e-07,6;UBERON:0010047,4.57e-07,6;UBERON:0000167,4.57e-07,6;UBERON:0007196,7.45e-07,15;UBERON:0001558,7.45e-07,15;UBERON:0002365,9.57e-07,31;UBERON:0002330,9.57e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,10.8122932060664,13.9560233594486,14.8540133048517,10.0231451726812,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,5.51652734687356,10.2410012384605,22.1852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.228886625269,18.9433549912122,13.3482399402395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.59406914713576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.08326009867495,5.18217629122586,13.7666205786722,0,0,0.116193942869518,0.829288440122964,0.252320850875628,0,0,0,0,0,0,0.709840800239063,0.505754070234305,0.482022059766964,0.661763836394364,0.653638332277218,0.474541238222193,0.808987848960987,0.196221465125346,0,0,0,0,0,0,0,0,0,4.5505722260952,0,25.0230650731666,19.1082980537953,7.33861498604905,11.6661440899747,0,0,0,0.115930404975077,0,0,0,0,6.3216351836742,8.58486162094873,0,0,0,5.62403003920662,18.8139983582723,10.7749073904214,21.7627210167921,11.0440896635306,22.6195780707475,0,0,0.414656231081544,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36567900037145,14.9791895559447,3.0239029332968,0,0,0,0,0,0,0,0,0,0,0,0,2.77976734060731,26.6673605503369,23.11232822291,0,0,0,9.92639148396306,4.6979355633693,3.92174884588428,10.2297457257282,5.91089121800104,0,0,0,0,0,3.51182841698397,3.05851527654046,8.31076008928724,4.02974558499921,0,0,0,0,0,8.24328093181778,0,0,12.0595762979196,9.75090369054782,0,0,0,0,0,0,0,0,0,17.3549161129027,26.3300392290195,11.2299186995234,28.8299675438317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1239862034145,10.7248364085726,11.9780083347455,8.84951727301724,26.6913331056163,26.9554361068201,21.2846473697604,16.999531615315,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2927297224521,0,0,0,0,7.87856799634377,8.61197574414652,5.52889263778618,0,0,0,0,0,1.9924798825107,1.65770349318689,0.503865495708552,0,0,0,2.24670877868317,10.5622493058609,0,1.87422470710174,0,0,0,0,0,18.4903710370516,16.967239999262,1.44999915086959,8.53450862141247,22.6285748760562,12.5285471337006,0,0,0,0,0,0,0,0,0,6.6452462746584,11.1538995422883,3.23191085715948,0,13.6032703588955,7.44988448601109,3.91130538919229,6.06102203490647,14.5640173508961,8.52855641629816,0,0,0,0,0,0,0,0,0,3.4278889713421,3.67517985728246,0,7.96209544862804,2.0345239835768,4.27721101453538,0,0,0,0,0,0,0,23.8710835097149,0,24.4642329766622,4.83962864194656,0,0,0,0,0,0,0,0,3.13070500632772,0.138674673013139,2.60339607502696,3.82170349916073,5.83296684088697,9.78469342155369,0,6.67618685894687,7.67437829404948,3.69519556739442,8.14707738502723,0,1.80784592624426,0,0,0,3.91102765469606,4.16825865307975,6.61704283691993,0.39961921916426,13.544499212486,0,0,0,0,23.3337094270627,0,0,0,0,0,0,0,0,0,0,0,0,4.3929380109778,0,0,0,0,5.82479747637269,2.12714592229504,2.47247575143499,2.29172049104229,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0.2249738915515,0.77380195455795,0,11.404779378375,27.9760260912154,19.4081976099493,0,0,13.6259790096806,0,0,2.79695391420225,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0.129282956361551,0,0.171086837884329,24.6685257810835,2.56289790162467,1.25763444079733,0.828478110694391,0,0,0,32.5554041462793,0,0,0,0,21.9875734750328,0,0,0,0,0,0,0,9.62349141308221,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,1.02496607435179,0.690860683462397,0,0,0,0,0,0,0,12.0447910314417,0,0,0,0,0,20.0027696038806,16.7960860208903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6665893301846,3.89300087047543,9.17142992608395,10.9749382842821,0,0,0,0.601682626794058,0,37.5126725391884,45.8336715342489,0,17.4470181736113,0.0675375846183947,0,0,0,0,19.7372796068586,4.96211178389294,0,15.2037288891118,0,0,1.21393120847326,2.73194629621557,20.0467356567564,0,0,0,0,0,0.667388411352415,5.80848887093804,0,2.24217730651031,0,7.77339328387037,0,0,0,0,0,0,2.27937780579341,3.414369541879,6.91259661814092,31.4065971938803,0,0,23.2862877605011,10.0807022159382,0,0,6.82318133966533,11.6798778002139,6.70548587402482,0,0,0,3.39997695141398,1.87151570769685,1.98950775161368,0,8.13211790680512,0,6.18947658623362,1.69783147837478,1.96703604453562,31.0409415598605,0.490296643507811,24.0390078043658,0,0,0,0,0,0.0644578879735772,0,10.7132363163395,11.9984256383335,12.3571704701319,8.76403665895821,12.8444199353271,0,0,0,0,5.81929524566941,0,0,0,0,0,0,0,0.26721740526556,2.6649520865105,0,2.95536923051134,7.23503151421682,0,0,4.69114760182158,8.33225510123091,0.387533459016037,0.869046000142011,0,21.7036809728542,12.7333829043678,5.6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| ||
|short_description=p7@GPR56 | |||
}} | }} |
Latest revision as of 04:12, 17 September 2015
Short description: | p7@GPR56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GPR56_5end |
Coexpression cluster: | C2379_smallcell_maxillary_malignant_kidney_pancreatic_signet_bronchioalveolar |
Association with transcript: | 87bp_to_NM_001145770, NM_005682, uc002emb.2, uc002emc.2_5end |
EntrezGene: | GPR56 |
HGNC: | 4512 |
UniProt: | B3KQN7B3KQV4Q9Y653 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.45e-31 | 253 |
endo-epithelial cell | 1.02e-26 | 42 |
endodermal cell | 8.52e-24 | 58 |
epithelial cell of alimentary canal | 4.44e-13 | 20 |
respiratory epithelial cell | 4.44e-13 | 13 |
epithelial cell of tracheobronchial tree | 1.94e-08 | 9 |
epithelial cell of lower respiratory tract | 1.94e-08 | 9 |
general ecto-epithelial cell | 1.02e-07 | 14 |
kidney tubule cell | 2.78e-07 | 10 |
nephron tubule epithelial cell | 2.78e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.22e-17 | 106 |
squamous cell carcinoma | 2.75e-12 | 14 |
cell type cancer | 1.28e-11 | 143 |
adenocarcinoma | 2.24e-08 | 25 |