FFCP PHASE1:Hg19::chr5:175963663..175963688,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22838 | |EntrezGene=22838 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19180 | |HGNC=19180 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-332bp_to_ENST00000509404_5end | |association_with_transcript=-332bp_to_ENST00000509404_5end | ||
|cluster_id=chr5:175963663..175963688,- | |||
|description=CAGE_peak_9_at_RNF44_5end | |description=CAGE_peak_9_at_RNF44_5end | ||
|id=chr5:175963663..175963688,- | |id=chr5:175963663..175963688,- | ||
|ontology_enrichment_celltype=CL:0000066!1.48e-11!254;CL:0000945!1.56e-09!24;CL:0000826!1.56e-09!24;CL:0000542!6.52e-09!53;CL:0000051!6.52e-09!53;CL:0000838!8.65e-09!52 | |ontology_enrichment_celltype=CL:0000066!1.48e-11!254;CL:0000945!1.56e-09!24;CL:0000826!1.56e-09!24;CL:0000542!6.52e-09!53;CL:0000051!6.52e-09!53;CL:0000838!8.65e-09!52 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.82e-11;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.08e-11,24;CL:0000826,3.08e-11,24;CL:0000066,1.27e-09,253;CL:0000542,4.10e-09,53;CL:0000051,4.10e-09,53;CL:0000838,5.90e-09,52;CL:0000988,3.12e-08,177;CL:0000037,2.40e-07,168 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.91e-18!235;DOID:14566!5.19e-17!239;DOID:2531!2.71e-14!51;DOID:0060083!2.71e-14!51;DOID:305!8.85e-11!106;DOID:0050686!9.76e-11!137;DOID:1240!3.68e-10!39;DOID:0050687!1.87e-09!143;DOID:8692!1.87e-08!31 | |ontology_enrichment_disease=DOID:162!1.91e-18!235;DOID:14566!5.19e-17!239;DOID:2531!2.71e-14!51;DOID:0060083!2.71e-14!51;DOID:305!8.85e-11!106;DOID:0050686!9.76e-11!137;DOID:1240!3.68e-10!39;DOID:0050687!1.87e-09!143;DOID:8692!1.87e-08!31 | ||
|ontology_enrichment_disease_v019=DOID:2531;1.79e-10;51!DOID:0060083;1.79e-10;51!DOID:8692;2.27e-09;31!DOID:1240;3.41e-09;39!DOID:0060058;4.38e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.79e-18,51;DOID:0060083,6.79e-18,51;DOID:162,1.05e-17,235;DOID:14566,1.88e-16,239;DOID:0050686,5.00e-13,137;DOID:1240,3.56e-12,39;DOID:8692,4.49e-10,31;DOID:305,5.44e-09,106;DOID:0060058,6.77e-08,10;DOID:0050687,8.03e-07,143 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002390;5.46e-08;32!UBERON:0000178;2.27e-07;15!UBERON:0000179;2.27e-07;15!UBERON:0000463;2.27e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.59e-07,15;UBERON:0000179,3.59e-07,15;UBERON:0000463,3.59e-07,15 | |||
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|short_description=p9@RNF44 | |short_description=p9@RNF44 | ||
}} | }} |
Latest revision as of 04:26, 17 September 2015
Short description: | p9@RNF44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RNF44_5end |
Coexpression cluster: | NA |
Association with transcript: | -332bp_to_ENST00000509404_5end |
EntrezGene: | RNF44 |
HGNC: | 19180 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.08e-11 | 24 |
pro-B cell | 3.08e-11 | 24 |
epithelial cell | 1.27e-09 | 253 |
lymphocyte | 4.10e-09 | 53 |
common lymphoid progenitor | 4.10e-09 | 53 |
lymphoid lineage restricted progenitor cell | 5.90e-09 | 52 |
hematopoietic cell | 3.12e-08 | 177 |
hematopoietic stem cell | 2.40e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood | 3.59e-07 | 15 |
haemolymphatic fluid | 3.59e-07 | 15 |
organism substance | 3.59e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.79e-18 | 51 |
immune system cancer | 6.79e-18 | 51 |
cancer | 1.05e-17 | 235 |
disease of cellular proliferation | 1.88e-16 | 239 |
organ system cancer | 5.00e-13 | 137 |
leukemia | 3.56e-12 | 39 |
myeloid leukemia | 4.49e-10 | 31 |
carcinoma | 5.44e-09 | 106 |
lymphoma | 6.77e-08 | 10 |
cell type cancer | 8.03e-07 | 143 |