FFCP PHASE1:Hg19::chr19:3224647..3224693,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60680 | |EntrezGene=60680 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14058 | |HGNC=14058 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N6W0 | |UniProt=Q8N6W0 | ||
|association_with_transcript=-7bp_to_ENST00000292672,NM_021938,uc002lxl.1,uc002lxm.2,uc010dtj.1_5end | |association_with_transcript=-7bp_to_ENST00000292672,NM_021938,uc002lxl.1,uc002lxm.2,uc010dtj.1_5end | ||
|cluster_id=chr19:3224647..3224693,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_3_at_CELF5_5end | |description=CAGE_peak_3_at_CELF5_5end | ||
Latest revision as of 05:28, 17 September 2015
| Short description: | p3@CELF5 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_CELF5_5end |
| Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
| Association with transcript: | -7bp_to_ENST00000292672, NM_021938, uc002lxl.1, uc002lxm.2, uc010dtj.1_5end |
| EntrezGene: | CELF5 |
| HGNC: | 14058 |
| UniProt: | Q8N6W0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@CELF5 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuronal stem cell | 7.76e-17 | 8 |
| neuron | 8.83e-12 | 6 |
| neuroblast | 8.83e-12 | 6 |
| electrically signaling cell | 8.83e-12 | 6 |
| embryonic stem cell | 7.73e-09 | 5 |
| neural cell | 7.06e-07 | 25 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 8.30e-87 | 89 |
| central nervous system | 1.06e-86 | 81 |
| regional part of nervous system | 1.40e-80 | 53 |
| regional part of brain | 1.40e-80 | 53 |
| neural tube | 9.27e-80 | 56 |
| neural rod | 9.27e-80 | 56 |
| future spinal cord | 9.27e-80 | 56 |
| neural keel | 9.27e-80 | 56 |
| cerebral hemisphere | 8.02e-72 | 32 |
| brain grey matter | 1.02e-71 | 34 |
Showing 1 to 10 of 86 entries
