FFCP PHASE1:Hg19::chr13:36705425..36705445,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=9201 | |EntrezGene=9201 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=2700 | |HGNC=2700 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=O15075,Q5VZY9 | |UniProt=O15075,Q5VZY9 | ||
|association_with_transcript=0bp_to_ENST00000255448,ENST00000360631,ENST00000379892_5end | |association_with_transcript=0bp_to_ENST00000255448,ENST00000360631,ENST00000379892_5end | ||
|cluster_id=chr13:36705425..36705445,- | |||
|coexpression_cluster_id=C561 | |coexpression_cluster_id=C561 | ||
|description=CAGE_peak_5_at_DCLK1_5end | |description=CAGE_peak_5_at_DCLK1_5end | ||
Latest revision as of 05:34, 17 September 2015
| Short description: | p5@DCLK1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_DCLK1_5end |
| Coexpression cluster: | C561_brain_Neural_spinal_Neurons_parietal_temporal_occipital |
| Association with transcript: | 0bp_to_ENST00000255448, ENST00000360631, ENST00000379892_5end |
| EntrezGene: | DCLK1 |
| HGNC: | 2700 |
| UniProt: | O15075Q5VZY9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@DCLK1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural cell | 4.58e-10 | 25 |
| oligodendrocyte | 8.85e-09 | 7 |
| macroglial cell | 8.85e-09 | 7 |
| astrocyte | 8.85e-09 | 7 |
| oligodendrocyte precursor cell | 8.85e-09 | 7 |
| neuronal stem cell | 1.36e-08 | 8 |
| neurectodermal cell | 9.21e-08 | 59 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 1.73e-87 | 81 |
| nervous system | 3.43e-84 | 89 |
| neural tube | 5.37e-79 | 56 |
| neural rod | 5.37e-79 | 56 |
| future spinal cord | 5.37e-79 | 56 |
| neural keel | 5.37e-79 | 56 |
| regional part of nervous system | 8.69e-74 | 53 |
| regional part of brain | 8.69e-74 | 53 |
| brain | 2.12e-71 | 68 |
| future brain | 2.12e-71 | 68 |
Showing 1 to 10 of 77 entries
