FFCP PHASE1:Hg19::chr11:2017178..2017212,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283120 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4713 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=5bp_to_BC106078_5end | |||
|cluster_id=chr11:2017178..2017212,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_16_at_H19_5end | |||
|id=chr11:2017178..2017212,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;4.39e-16;19!CL:0002577;2.81e-07;3!CL:0002541;3.46e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.20e-16,19;CL:0002577,2.81e-07,3;CL:0002541,3.57e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.40e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.40e-12!14;UBERON:0000158!7.40e-12!14;UBERON:0001737!2.71e-10!9;UBERON:0001557!4.88e-10!19;UBERON:0000478!5.67e-10!24;UBERON:0003124!4.10e-09!7;UBERON:0004923!1.54e-08!57;UBERON:0003104!2.83e-08!238;UBERON:0009142!2.83e-08!238;UBERON:0000481!5.64e-07!347;UBERON:0003103!6.65e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.65e-16;9!UBERON:0001557;1.65e-16;9!UBERON:0000478;2.60e-16;24!UBERON:0005631;6.30e-13;10!UBERON:0000158;6.30e-13;10!UBERON:0001134;2.03e-11;16!UBERON:0002036;2.03e-11;16!UBERON:0001987;5.43e-09;4!UBERON:0000305;9.34e-08;7!UBERON:0000922;1.67e-07;49!UBERON:0003124;3.46e-07;3!UBERON:0000920;3.46e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.11e-20,14;UBERON:0000158,5.11e-20,14;UBERON:0001737,1.57e-16,9;UBERON:0000478,2.45e-16,24;UBERON:0003124,1.65e-14,7;UBERON:0001557,2.11e-12,19;UBERON:0001987,5.28e-09,4;UBERON:0004340,5.28e-09,4;UBERON:0000305,9.36e-08,7;UBERON:0000920,3.57e-07,3 | |||
|phase1_expression=3.27021082687002,1.71280419112787,1.26858963686374,2.00146596706261,0.446961094427288,14.8297549097063,0,0.631719873426831,0.261185628199839,0.737201809504527,2.09340350391728,13.980247816331,33.2346392567852,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,1.23852898652861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,0.12786256184353,0,0,0,0.795285947051099,4.86634870302636,0.0945348171640679,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0.560677600142307,0,0,0.622422070799533,0,0.163461903113459,0.908144565869588,6.91411109375999,0.937285727335186,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,1.74290914304278,0.207322110030741,0.504641701751257,0,0,0,0,0,0,9.7011576032672,6.74338760312407,8.67639707580535,7.38969617307039,6.972142210957,6.64357733511071,9.03369764673102,7.6526371398885,8.0796902958742,0.738155454624648,0,3.2925920906512,4.41026134156626,1.26755034821831,0,0,0,0,0,0,0,0,5.09236448371913,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57275793023962,77.0522679655849,0.823240336780769,0,0.355391948742546,1.58390374586686,0,0,0,0,0,0,0,0,0,2.60606352001643,4.31500277355805,2.86497541183833,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,1.10422342547226,0.500170521059677,0.542530047399471,0,0,0,0,0.601892199455438,0,3.10419213877515,0,0,0,8.61525092836058,13.0394501048125,0,0,0,28.7971192873946,129.819642818188,17.8410273064511,5.45837177201309,0.460385919864187,5.3325417942284,3.71603532841533,1.53512174720011,1.60853921143608,4.45254199334973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0.647747748306418,3.08454505380579,0,1.00337954770971,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0.96670718292122,0.770243085573222,1.07452572308291,0.551346289938122,0.859361958946189,1.74020032697074,1.10794615640931,6.41030656656509,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,22.2528273777639,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.589494246078727,0,0,0,0.658589785919804,0,1.74967360122491,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0.121360521749513,0,0,81.65061378029,53.7506072307076,201.190259874997,0,0,0,0,1.26675244876796,0.19924798825107,0.276283915531148,3.77899121781414,0,0,0,0,0,0,1.479651084554,0,0,0,0,0,0,0,0,0.227586896570999,0,1.41832609060762,0.689486746482929,0,0,0,0,0,0,0,0,0,0,1.23120413606075,0,0.23056390438806,6.64206568632314,6.41019494339848,56.4632052725498,7.32780747214898,224.940675479864,0,0,0,0,0.19606253431774,0.335643173951685,0,0,0,0,0,0,0,0.0884575645033392,2.4441205797345,0,0,0,0.067401132980677,78.6526094352813,0,0,0,0,0.394584402849391,14.5188859258397,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0.0821154570532092,0.678923115418936,0,3.16373037092745,0,0,0,0.195551382734803,0,0,57.3453579500714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.687481272035051,0.717873024576814,0.199679000498991,0.429226048136571,0.223171457441873,2.5529719544956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,2.09818352539992,0,0,0,0.714695326373367,3.97255182219259,0.5085370753095,0,0,0,0,0,0,0,1.17241786942466,51.6776866757663,0,0,0,0,0.213574825135389,1.25763444079733,0.414239055347196,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0012494098419,0.686791410365586,0.336749488765919,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,3.45039396469382,0,1.20130602011215,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0.550285795565037,10.3973099535304,0.381382095467167,0,0,0.526472298444801,0,0,20.6906288640324,0,0.147856086217045,0,0,0,0,0,0,5.45832296228224,0,0.255524855279191,0,0,0,0,9.84596308805291,0,1.37190407549935,0,0,0,0,0.235479278551542,0,5.60544326627578,12.7842220871329,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,2.54032230114557,3.2074961596167,0,0,0,0,0,10.3588613950063,2.77189578511867,27.8355463521168,33.9997695141398,0,0,0,0,0,0,0.0771741581079447,5.68254857310289,0.470317296361523,1.47088993052343,0.235676547101626,0,0,5.4945244585842,0.169927114687817,0,1.80482086326016,0,1.60698544745092,0,0,2.19100916473955,0.917458566809082,0,0,0,0,19.0449662585544,0.371995018166751,1.84870251452567,7.35465155610441,0.126166424835079,0,0.380095503034311,0,0,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| |||
|short_description=p16@H19 | |||
}} |
Latest revision as of 06:20, 17 September 2015
Short description: | p16@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 5bp_to_BC106078_5end |
EntrezGene: | H19 |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.20e-16 | 19 |
placental epithelial cell | 2.81e-07 | 3 |
chorionic membrane mesenchymal stem cell | 3.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.11e-20 | 14 |
membranous layer | 5.11e-20 | 14 |
larynx | 1.57e-16 | 9 |
extraembryonic structure | 2.45e-16 | 24 |
chorion | 1.65e-14 | 7 |
upper respiratory tract | 2.11e-12 | 19 |
placenta | 5.28e-09 | 4 |
allantois | 5.28e-09 | 4 |
amnion | 9.36e-08 | 7 |
egg chorion | 3.57e-07 | 3 |