FFCP PHASE1:Hg19::chr19:33555780..33555801,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85415 | |EntrezGene=85415 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19974 | |HGNC=19974 | ||
|TSSclassifier=strong | |||
|UniProt=A8MT19 | |UniProt=A8MT19 | ||
|association_with_transcript=0bp_to_ENST00000400226_5end | |association_with_transcript=0bp_to_ENST00000400226_5end | ||
|cluster_id=chr19:33555780..33555801,- | |||
|coexpression_cluster_id=C224 | |coexpression_cluster_id=C224 | ||
|description=CAGE_peak_1_at_RHPN2_5end | |description=CAGE_peak_1_at_RHPN2_5end | ||
|id=chr19:33555780..33555801,- | |id=chr19:33555780..33555801,- | ||
|ontology_enrichment_celltype=CL:0000066!3.88e-32!254;CL:0000223!4.03e-11!59;CL:0002321!3.99e-08!248;CL:0000220!1.23e-07!246;CL:0002076!2.62e-07!43 | |ontology_enrichment_celltype=CL:0000066!3.88e-32!254;CL:0000223!4.03e-11!59;CL:0002321!3.99e-08!248;CL:0000220!1.23e-07!246;CL:0002076!2.62e-07!43 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.29e-32,253;CL:0000223,1.27e-11,58;CL:0002076,4.69e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.53e-09;30!UBERON:0006595;1.36e-07;86!CL:0000223;7.31e-07;58 | |||
|ontology_enrichment_disease=DOID:305!8.35e-32!106;DOID:0050687!4.37e-29!143;DOID:162!1.12e-15!235;DOID:14566!1.55e-14!239;DOID:299!2.36e-12!25;DOID:7!2.02e-07!39 | |ontology_enrichment_disease=DOID:305!8.35e-32!106;DOID:0050687!4.37e-29!143;DOID:162!1.12e-15!235;DOID:14566!1.55e-14!239;DOID:299!2.36e-12!25;DOID:7!2.02e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:299;1.26e-12;25!DOID:305;5.83e-10;106!DOID:0050687;3.99e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.34e-32,106;DOID:0050687,2.92e-29,143;DOID:162,7.29e-17,235;DOID:14566,2.75e-15,239;DOID:299,1.07e-12,25;DOID:7,4.84e-07,39 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000489;3.53e-09;29!UBERON:0005172;1.06e-08;52!UBERON:0005173;1.06e-08;52!UBERON:0002113;1.81e-08;24!UBERON:0011143;1.81e-08;24!UBERON:0002423;4.07e-08;25!UBERON:0006554;1.10e-07;30!UBERON:0001008;1.10e-07;30!UBERON:0005409;2.36e-07;22!UBERON:0005177;8.03e-07;99 | |||
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| ||
|short_description=p1@RHPN2 | |short_description=p1@RHPN2 | ||
}} | }} |
Latest revision as of 06:22, 17 September 2015
Short description: | p1@RHPN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RHPN2_5end |
Coexpression cluster: | C224_clear_serous_pleomorphic_choriocarcinoma_mesothelioma_amniotic_renal |
Association with transcript: | 0bp_to_ENST00000400226_5end |
EntrezGene: | RHPN2 |
HGNC: | 19974 |
UniProt: | A8MT19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.29e-32 | 253 |
endodermal cell | 1.27e-11 | 58 |
endo-epithelial cell | 4.69e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.34e-32 | 106 |
cell type cancer | 2.92e-29 | 143 |
cancer | 7.29e-17 | 235 |
disease of cellular proliferation | 2.75e-15 | 239 |
adenocarcinoma | 1.07e-12 | 25 |
disease of anatomical entity | 4.84e-07 | 39 |