FFCP PHASE1:Hg19::chr8:18942514..18942527,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:18942514..18942527,-
|short_description=p24@PSD3
|description=CAGE_peak_24_at_PSD3_5end
|association_with_transcript=-274bp_to_ENST00000521475_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23362 | |EntrezGene=23362 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19093 | |HGNC=19093 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIH3 | |UniProt=E5RIH3 | ||
|association_with_transcript=-274bp_to_ENST00000521475_5end | |||
|cluster_id=chr8:18942514..18942527,- | |||
|coexpression_cluster_id=C1542 | |||
|description=CAGE_peak_24_at_PSD3_5end | |||
|id=chr8:18942514..18942527,- | |||
|ontology_enrichment_celltype=CL:0000055!5.50e-29!180;CL:0002620!1.32e-20!23;CL:0000057!3.60e-20!75;CL:0000048!4.54e-13!430;CL:0000723!1.69e-12!436;CL:0000034!9.09e-12!444;CL:0002371!3.53e-10!591;CL:0002320!6.55e-09!365;CL:0000144!2.70e-08!625;CL:0000219!6.55e-08!390;CL:0000134!1.22e-07!358;CL:0000680!1.29e-07!57;CL:0000056!1.29e-07!57;CL:0000355!1.29e-07!57;CL:0000548!2.92e-07!679;CL:0000004!2.92e-07!679;CL:0000255!2.92e-07!679;CL:0002540!4.14e-07!6;CL:0000012!4.44e-07!682;CL:0002092!5.20e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000515;1.86e-27;3!CL:0000056;9.12e-21;4!CL:0002620;9.79e-19;23!CL:0002540;3.07e-14;6!CL:0000680;3.96e-12;7!CL:0002174;2.50e-10;1!CL:0000501;2.50e-10;1!CL:0002092;9.32e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,2.36e-20,4;CL:0002620,8.01e-19,23;CL:0002540,2.19e-14,6;CL:0002174,1.43e-10,1;CL:0000501,1.43e-10,1;CL:0002092,7.63e-09,10 | |||
|ontology_enrichment_development_v019=CL:0000515;9.12e-21;4 | |||
|ontology_enrichment_disease=DOID:17!2.04e-08!5;DOID:450!2.04e-08!5;DOID:66!2.04e-08!5;DOID:423!2.04e-08!5;DOID:0080000!2.04e-08!5;DOID:11722!2.04e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:4231;6.51e-19;2!DOID:1907;6.51e-19;2!DOID:17;2.88e-08;5!DOID:450;2.88e-08;5!DOID:66;2.88e-08;5!DOID:423;2.88e-08;5!DOID:0080000;2.88e-08;5!DOID:11722;2.88e-08;5!DOID:201;6.67e-07;6!DOID:0060100;6.67e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,4.96e-19,2;DOID:1907,4.96e-19,2;DOID:17,2.45e-08,5;DOID:450,2.45e-08,5;DOID:66,2.45e-08,5;DOID:423,2.45e-08,5;DOID:0080000,2.45e-08,5;DOID:11722,2.45e-08,5;DOID:201,6.11e-07,6;DOID:0060100,6.11e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002199!6.52e-12!45;UBERON:0002416!6.52e-12!45;UBERON:0002097!1.49e-11!40;UBERON:0000914!6.62e-11!83;UBERON:0002329!6.62e-11!83;UBERON:0003077!6.62e-11!83;UBERON:0003059!6.62e-11!83;UBERON:0007282!6.62e-11!83;UBERON:0009618!6.62e-11!83;UBERON:0007285!6.62e-11!83;UBERON:0002384!1.63e-09!375;UBERON:0003102!2.42e-08!95;UBERON:0004290!6.79e-08!70;UBERON:0001134!9.93e-07!61;UBERON:0002036!9.93e-07!61;UBERON:0003082!9.93e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.93e-08;41!UBERON:0002371;2.24e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.03e-10,41;UBERON:0002199,4.74e-09,46;UBERON:0002416,4.74e-09,46 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,1.23766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.724232594804119,0.795285947051099,0.973269740605272,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.573673241497627,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0.448346041655403,0,0.161872944368132,0.561803226808994,0.204154171254893,0.368502951935304,0.103325781175765,0,0.494533858557114,0,0,0,0.375355559615893,0.277064115484183,0.438977620880838,0.612975591598039,0.600952235626387,0,1.61450672119976,0.427114777637135,0.847727604638247,2.40072876867522,0.412210116953756,1.54584324027377,0.558350568994769,0.506328996723799,0.194874010322397,3.02920529092937,0.828449087780694,0,2.13005755509969,0.604512589365842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0.26593811658487,0,0.514414748524284,0,0.532844358032199,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,1.15825045334063,1.2328579353023,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0.271265023699736,0,0.713715955188647,0,0.234282829985426,0,0,0,1.32845119707087,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0.462629081407967,0.355123450626254,1.06765302817952,0.519254429183621,0.348631135379878,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676695028044854,0,0.307007349452259,0,0.537101224341368,0.435050081742686,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0,0,1.59101623962968,0.78494864019923,0,0,0.353437207037059,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0.251932747854276,0.715880777515084,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,3.15614493394321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0.577901179803038,0,0,0,1.71906176567983,0,0.837847203816763,0,0,0,0,0.223171457441873,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,1.43429871466276,0,0,0,0,0,0,0,0,0,4.94125263177723,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0.298509605773748,0,0.554805861502613,1.32582103692562,2.51567901752575,1.77962244319307,0.228840068396924,0.907385542579434,0,0.147855149989634,0,0,0.155262956876259,0,0.797525143673985,0,0,0,0.406870733204662,0.363697318405119,0,0.464033759878494,0.796191777397232,2.40016658797892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,1.70254786070051,1.28874165176289,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,1.23766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.724232594804119,0.795285947051099,0.973269740605272,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.573673241497627,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0.448346041655403,0,0.161872944368132,0.561803226808994,0.204154171254893,0.368502951935304,0.103325781175765,0,0.494533858557114,0,0,0,0.375355559615893,0.277064115484183,0.438977620880838,0.612975591598039,0.600952235626387,0,1.61450672119976,0.427114777637135,0.847727604638247,2.40072876867522,0.412210116953756,1.54584324027377,0.558350568994769,0.506328996723799,0.194874010322397,3.02920529092937,0.828449087780694,0,2.13005755509969,0.604512589365842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0.26593811658487,0,0.514414748524284,0,0.532844358032199,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,1.15825045334063,1.2328579353023,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0.271265023699736,0,0.713715955188647,0,0.234282829985426,0,0,0,1.32845119707087,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0.462629081407967,0.355123450626254,1.06765302817952,0.519254429183621,0.348631135379878,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676695028044854,0,0.307007349452259,0,0.537101224341368,0.435050081742686,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0,0,1.59101623962968,0.78494864019923,0,0,0.353437207037059,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0.251932747854276,0.715880777515084,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,3.15614493394321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0.577901179803038,0,0,0,1.71906176567983,0,0.837847203816763,0,0,0,0,0.223171457441873,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,1.43429871466276,0,0,0,0,0,0,0,0,0,4.94125263177723,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0.298509605773748,0,0.554805861502613,1.32582103692562,2.51567901752575,1.77962244319307,0.228840068396924,0.907385542579434,0,0.147855149989634,0,0,0.155262956876259,0,0.797525143673985,0,0,0,0.406870733204662,0.363697318405119,0,0.464033759878494,0.796191777397232,2.40016658797892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,1.70254786070051,1.28874165176289,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p24@PSD3 | |||
}} | }} |
Latest revision as of 06:56, 17 September 2015
Short description: | p24@PSD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_PSD3_5end |
Coexpression cluster: | C1542_Fibroblast_ductal_liposarcoma_large_normal_mesenchymal_Myoblast |
Association with transcript: | -274bp_to_ENST00000521475_5end |
EntrezGene: | PSD3 |
HGNC: | 19093 |
UniProt: | E5RIH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 2.36e-20 | 4 |
skin fibroblast | 8.01e-19 | 23 |
mesenchymal stem cell of the bone marrow | 2.19e-14 | 6 |
follicular cell of ovary | 1.43e-10 | 1 |
granulosa cell | 1.43e-10 | 1 |
bone marrow cell | 7.63e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.03e-10 | 41 |
integument | 4.74e-09 | 46 |
integumental system | 4.74e-09 | 46 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 4.96e-19 | 2 |
malignant fibroxanthoma | 4.96e-19 | 2 |
musculoskeletal system disease | 2.45e-08 | 5 |
myotonic disease | 2.45e-08 | 5 |
muscle tissue disease | 2.45e-08 | 5 |
myopathy | 2.45e-08 | 5 |
muscular disease | 2.45e-08 | 5 |
myotonic dystrophy | 2.45e-08 | 5 |
connective tissue cancer | 6.11e-07 | 6 |
musculoskeletal system cancer | 6.11e-07 | 6 |