FFCP PHASE1:Hg19::chr2:42795483..42795497,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57504 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23784 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-159bp_to_ENST00000407270_5end | |||
|cluster_id=chr2:42795483..42795497,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_16_at_MTA3_5end | |||
|id=chr2:42795483..42795497,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.75e-15!5;CL:0000945!7.47e-08!24;CL:0000826!7.47e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.85e-30;5!CL:0000785;1.03e-17;1!CL:0000819;1.03e-17;1!CL:0000540;3.44e-12;6!CL:0000404;3.44e-12;6!CL:0002321;1.50e-10;15!CL:0000945;8.42e-07;24!CL:0000632;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.59e-30,5;CL:0000819,1.44e-17,1;CL:0000540,3.26e-12,6;CL:0000031,3.26e-12,6;CL:0000404,3.26e-12,6;CL:0000785,1.86e-09,2;CL:0000955,1.86e-09,2;CL:0000818,1.86e-09,2;CL:0000954,1.86e-09,2;CL:0000816,1.86e-09,2;CL:0000047,2.16e-09,8;CL:0000945,8.09e-07,24;CL:0000826,8.09e-07,24;CL:0000632,8.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;3.44e-12;6!CL:0000954;1.57e-09;2 | |||
|ontology_enrichment_disease=DOID:0060058!2.05e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.03e-17;1!DOID:8675;1.03e-17;1!DOID:0060058;1.65e-15;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.44e-17,1;DOID:8675,1.44e-17,1;DOID:0060058,1.50e-15,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,2.94375362205146,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0,0,0.286804595389004,1.82960559194393,2.25300606146525,0.929551542956147,0.518305275076852,1.26160425437814,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0.441463099414651,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0.552567831062295,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0.269272933229316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0,0,0,0,0,0,0,1.19472429772959,0,0,0.173559738335131,0,0.0870592065804026,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.202210631562555,0,0,0,0,0.803765742325096,2.88832816854191,2.9080823662043,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0.171086837884329,0,0,0,0,0,0,1.70509637733254,0,0,0,0,0,0.314108192500469,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.197318320688547,0,0,0.156986185701028,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.237840181555137,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0.250707539292375,0.227336094654718,1.07185652062471,0,0,0,0,0.129177819672012,0.186224142887574,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p16@MTA3 | |||
}} |
Latest revision as of 07:17, 17 September 2015
Short description: | p16@MTA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_MTA3_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -159bp_to_ENST00000407270_5end |
EntrezGene: | MTA3 |
HGNC: | 23784 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.59e-30 | 5 |
B-1 B cell | 1.44e-17 | 1 |
neuron | 3.26e-12 | 6 |
neuroblast | 3.26e-12 | 6 |
electrically signaling cell | 3.26e-12 | 6 |
mature B cell | 1.86e-09 | 2 |
pre-B-II cell | 1.86e-09 | 2 |
transitional stage B cell | 1.86e-09 | 2 |
small pre-B-II cell | 1.86e-09 | 2 |
immature B cell | 1.86e-09 | 2 |
neuronal stem cell | 2.16e-09 | 8 |
lymphocyte of B lineage | 8.09e-07 | 24 |
pro-B cell | 8.09e-07 | 24 |
hepatic stellate cell | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.44e-17 | 1 |
lymphosarcoma | 1.44e-17 | 1 |
lymphoma | 1.50e-15 | 10 |