FFCP PHASE1:Hg19::chr1:153747915..153747927,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=11000 | |EntrezGene=11000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=10997 | |HGNC=10997 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=120bp_to_ENST00000468403_5end | |association_with_transcript=120bp_to_ENST00000468403_5end | ||
|cluster_id=chr1:153747915..153747927,+ | |||
|coexpression_cluster_id=C54 | |coexpression_cluster_id=C54 | ||
|description=CAGE_peak_5_at_SLC27A3_5end | |description=CAGE_peak_5_at_SLC27A3_5end | ||
Latest revision as of 07:22, 17 September 2015
| Short description: | p5@SLC27A3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_SLC27A3_5end |
| Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
| Association with transcript: | 120bp_to_ENST00000468403_5end |
| EntrezGene: | SLC27A3 |
| HGNC: | 10997 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@SLC27A3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| immature conventional dendritic cell | 4.07e-32 | 5 |
| common dendritic progenitor | 4.07e-32 | 5 |
| conventional dendritic cell | 1.54e-21 | 8 |
| dendritic cell | 1.11e-17 | 10 |
| macrophage dendritic cell progenitor | 2.64e-14 | 61 |
| granulocyte monocyte progenitor cell | 5.99e-13 | 67 |
| monopoietic cell | 1.00e-11 | 59 |
| monocyte | 1.00e-11 | 59 |
| monoblast | 1.00e-11 | 59 |
| promonocyte | 1.00e-11 | 59 |
Showing 1 to 10 of 20 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 2.61e-11 | 76 |
| bone element | 2.06e-10 | 82 |
| skeletal element | 2.11e-09 | 90 |
| immune system | 4.57e-09 | 93 |
| hematopoietic system | 1.49e-08 | 98 |
| blood island | 1.49e-08 | 98 |
| skeletal system | 2.32e-08 | 100 |
| hemolymphoid system | 1.15e-07 | 108 |
| hepatic sinusoid | 4.42e-07 | 2 |
| abdomen blood vessel | 4.42e-07 | 2 |
Showing 1 to 10 of 12 entries
