FFCP PHASE1:Hg19::chr12:129308041..129308100,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:129308041..129308100,- to FFCP PHASE1:Hg19::chr12:129308041..129308100,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=121260 | |EntrezGene=121260 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23090 | |HGNC=23090 | ||
|TSSclassifier=strong | |||
|UniProt=B6ZDF2 | |UniProt=B6ZDF2 | ||
|association_with_transcript=0bp_to_ENST00000376740_5end | |||
|cluster_id=chr12:129308041..129308100,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_SLC15A4_5end | |||
|id=chr12:129308041..129308100,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.70e-25;8!CL:0000775;2.00e-25;3!CL:0000081;1.61e-18;11!CL:0000771;3.37e-17;2!CL:0000342;3.00e-09;1!CL:0002565;3.00e-09;1!CL:0002581;3.00e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.47e-25,8;CL:0000775,1.85e-25,3;CL:0000081,1.44e-18,11;CL:0000771,2.87e-17,2;CL:0002581,2.16e-09,1;CL:0000342,5.28e-09,1;CL:0002565,5.28e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;3.00e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,3.00e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002506;3.00e-09;1!UBERON:0001769;3.00e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002506,5.28e-09,1;UBERON:0001769,5.28e-09,1 | |||
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| ||
|short_description=p4@SLC15A4 | |||
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Latest revision as of 07:42, 17 September 2015
Short description: | p4@SLC15A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC15A4_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000376740_5end |
EntrezGene: | SLC15A4 |
HGNC: | 23090 |
UniProt: | B6ZDF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.47e-25 | 8 |
neutrophil | 1.85e-25 | 3 |
blood cell | 1.44e-18 | 11 |
eosinophil | 2.87e-17 | 2 |
perirenal preadipocyte | 2.16e-09 | 1 |
pigment cell (sensu Vertebrata) | 5.28e-09 | 1 |
iris pigment epithelial cell | 5.28e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
iris epithelium | 5.28e-09 | 1 |
iris | 5.28e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 3.00e-09 | 1 |