FFCP PHASE1:Hg19::chr4:20985547..20985564,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=80333 | |EntrezGene=80333 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=30083 | |HGNC=30083 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000382149_5end | |association_with_transcript=0bp_to_ENST00000382149_5end | ||
|cluster_id=chr4:20985547..20985564,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_17_at_KCNIP4_5end | |description=CAGE_peak_17_at_KCNIP4_5end | ||
Latest revision as of 07:46, 17 September 2015
| Short description: | p17@KCNIP4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_17_at_KCNIP4_5end |
| Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
| Association with transcript: | 0bp_to_ENST00000382149_5end |
| EntrezGene: | KCNIP4 |
| HGNC: | 30083 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p17@KCNIP4 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| ciliated cell | 1.54e-09 | 3 |
| ciliated epithelial cell | 1.54e-09 | 3 |
| multi-ciliated epithelial cell | 1.54e-09 | 3 |
| non-pigmented ciliary epithelial cell | 1.54e-09 | 3 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| pineal body | 8.82e-51 | 2 |
| regional part of epithalamus | 8.82e-51 | 2 |
| secretory circumventricular organ | 8.82e-51 | 2 |
| circumventricular organ | 8.82e-51 | 2 |
| epithalamus | 8.82e-51 | 2 |
| gland of diencephalon | 5.23e-26 | 4 |
| neuroendocrine gland | 5.23e-26 | 4 |
| regional part of diencephalon | 5.23e-26 | 4 |
| vermiform appendix | 1.26e-25 | 1 |
| caecum | 1.26e-25 | 1 |
Showing 1 to 10 of 49 entries
