FFCP PHASE1:Hg19::chr11:2153449..2153463,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5466 | |||
|TSSclassifier=strong | |||
|UniProt=P09565 | |||
|association_with_transcript=-484bp_to_AF318382_5end | |||
|cluster_id=chr11:2153449..2153463,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_5_at_IGF2_5end | |||
|id=chr11:2153449..2153463,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.90e-10;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.88e-10,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.22e-17!115;UBERON:0000481!3.42e-16!347;UBERON:0000475!3.87e-14!365;UBERON:0000468!6.48e-14!659;UBERON:0000064!9.79e-12!219;UBERON:0000119!1.52e-11!312;UBERON:0000922!1.96e-11!612;UBERON:0000483!3.98e-11!309;UBERON:0000062!5.23e-11!511;UBERON:0005631!1.03e-10!14;UBERON:0000158!1.03e-10!14;UBERON:0003075!1.15e-10!86;UBERON:0007284!1.15e-10!86;UBERON:0002616!2.09e-10!59;UBERON:0000153!2.40e-10!129;UBERON:0007811!2.40e-10!129;UBERON:0004119!2.75e-10!169;UBERON:0000925!2.75e-10!169;UBERON:0006595!2.75e-10!169;UBERON:0000033!6.11e-10!123;UBERON:0005743!8.28e-10!86;UBERON:0002346!8.57e-10!90;UBERON:0000955!9.57e-10!69;UBERON:0006238!9.57e-10!69;UBERON:0001017!1.10e-09!82;UBERON:0004121!1.13e-09!169;UBERON:0001049!1.21e-09!57;UBERON:0005068!1.21e-09!57;UBERON:0006241!1.21e-09!57;UBERON:0007135!1.21e-09!57;UBERON:0002050!1.24e-09!605;UBERON:0005423!1.24e-09!605;UBERON:0000477!2.29e-09!286;UBERON:0000923!2.68e-09!604;UBERON:0005291!2.68e-09!604;UBERON:0006598!2.68e-09!604;UBERON:0002532!2.68e-09!604;UBERON:0000924!3.74e-09!173;UBERON:0006601!3.74e-09!173;UBERON:0000467!9.10e-09!625;UBERON:0000073!1.28e-08!94;UBERON:0001016!1.28e-08!94;UBERON:0000480!1.33e-08!626;UBERON:0002100!1.44e-07!216;UBERON:0001007!2.62e-07!155;UBERON:0001555!2.62e-07!155;UBERON:0007026!2.62e-07!155;UBERON:0000478!2.83e-07!24;UBERON:0003056!3.58e-07!61;UBERON:0004111!5.07e-07!241;UBERON:0004921!8.66e-07!129;UBERON:0004185!8.66e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;3.48e-09;24!UBERON:0005631;4.07e-09;10!UBERON:0000158;4.07e-09;10!UBERON:0000077;1.31e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.69e-17,114;UBERON:0011216,1.35e-15,223;UBERON:0005631,2.91e-12,14;UBERON:0000158,2.91e-12,14;UBERON:0004119,1.36e-11,160;UBERON:0000925,1.36e-11,160;UBERON:0006595,1.36e-11,160;UBERON:0000119,3.32e-10,309;UBERON:0000483,5.64e-10,306;UBERON:0000478,3.47e-09,24;UBERON:0003104,1.03e-08,160;UBERON:0009142,1.03e-08,160;UBERON:0003075,1.65e-08,82;UBERON:0007284,1.65e-08,82;UBERON:0001008,7.79e-08,48;UBERON:0001007,1.05e-07,145;UBERON:0001555,1.05e-07,145;UBERON:0007026,1.05e-07,145;UBERON:0006554,1.19e-07,47;UBERON:0000955,1.94e-07,68;UBERON:0006238,1.94e-07,68;UBERON:0004121,2.00e-07,171;UBERON:0000924,2.00e-07,171;UBERON:0006601,2.00e-07,171;UBERON:0002346,2.04e-07,86;UBERON:0001017,3.05e-07,81;UBERON:0001049,3.25e-07,56;UBERON:0005068,3.25e-07,56;UBERON:0006241,3.25e-07,56;UBERON:0007135,3.25e-07,56;UBERON:0003124,3.55e-07,7;UBERON:0004921,4.94e-07,118;UBERON:0000922,6.30e-07,592 | |||
|phase1_expression=14.5342703416445,15.2011371962598,3.24195129420734,6.00439790118782,2.68176656656373,6.97870819280295,0,0,0.783556884599516,10.5665592695649,0.697801167972428,532.99694799762,427.302504730095,28.2187284748906,7.62213964174206,0,0,0,0,1.72369481307503,7.54802557603736,18.4938285672072,0,0.410623275218653,1.12988375635323,0,0.0821005894499457,0,0,0,6.96672554922342,0,0,1.10926203050036,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.895037932904712,0,1.50401373190767,29.2589968300864,0,2.43317435151318,3.02511414925017,3.54767035940102,7.99296549807447,5.56661070865279,0.364295288292542,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0.419499436209906,5.77747888074142,0,0.516833518338658,0.35576626268671,7.02913286805807,0,0,0,0.367663080345869,2.43042584364528,0.267899184852239,0,0,0,0,2.5648244150257,0,0,3.48875241714027,0,0.633152558322899,0.132409180813219,0,1.06400514659507,1.68203280042692,0,1.2333377420858,2.48968828319813,0.404132016209064,0,20.4332527320657,142.89162927104,6.32667865951251,0,0,0,0,0,0,0.204154171254893,5.15904132709426,0.309977343527296,20.1960485737949,91.488763833066,0,0,8.24846958374924,4.00379263590285,0.554128230968366,6.58466431321257,1.5324389789951,3.90618953157152,4.99101605904093,0.179389635688862,4.27114777637135,0.635795703478686,0,0,0,0.18611685633159,0.506328996723799,0,0,0.184099797284599,2.90962902273861,0,0,2.37384829234683,0,0,0,0.487894824518382,0.662648841607426,45.8966074334598,30.9946554495958,17.4101387104184,0,0,0,0,207.108095902263,3.60939740834793,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,1.40241773803446,2.057870056657,30.8718293909638,74.7854705448802,20.6393715502301,83.8921667487594,0,438.08481809057,0.857839051492628,0.109750285408626,0,0,25.9247646443883,5.2129328849652,0,4.3299402607582,5.56465943880369,0.70445216541493,0,0,0,0,0,0,0,0,0,1.17587489739202,0,0.0895585227028483,0,0,0,0,0.414656231081544,0,0,0.063497894292169,0,0,3.4214489204541,0.102827492703324,0,0,0.560655421726804,15.2586024091648,2.56684000373325,0,3.57656445851882,0.845302752556,21.8069255599594,13.5209667984776,9.25946547343712,7.09245660116391,9.59119844457958,102.801177440208,639.20825115112,38.6922958286961,0.325736184293735,72.1445655947368,22.9666043150694,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,16.505068960104,27.9447798668521,8.95304816199478,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,124.531864094927,38.0129596005355,10.0368058768902,86.0999366737541,57.4541343926861,52.5149042063003,63.2563640960651,1.50473049863859,4.5481500811197,12.4167685551006,0,4.60922921354258,0.347534457872331,201.870993344086,183.581731738808,0,0,0,104.882139720406,297.91943672379,367.706596688891,2.48107807818777,13.3511916760614,7.57782254969299,0.640695746278505,41.448287174403,12.707459770345,2.96836132889982,0,0,0,5.19254429183621,0,554.382295276771,8.82228469334453,6.16942625870505,18.4851261545017,18.5732991366851,31.8632328351401,2.25599806453706,16.9433741629712,0,1.46139224653261,2.42768746453614,1.13733384070897,0.170093705276516,15.1141141271498,21.5918153766405,17.6115184403504,20.569280728049,0.254876273045038,0,1.34324852833307,3.50815802633495,1.3071772551245,0,1.64007322849853,0.976135183992909,68.7283547690308,0.732555718546747,0.41254749960294,0,0,0,17.400729292582,1.07834031980251,1.68854042198743,4.54860689198951,1.6113036730241,17.6920366575359,10.3976485447643,230.236844182463,11.5699440752685,3.84380134730212,2.55225424989168,8.39609581101064,0.464845549297286,0.31481234683064,0.6970372701606,0,0,0.869932992075073,0,0,9.67611760335135,32.9034601707475,17.5379778409919,3.83846686967001,49.2129836239009,0,0,20.8652050796645,4.39259247577688,7.89343095716099,0,0,0,27.3074893890171,0,0,17.7449884830381,4.24216295861138,0,0.551365343546124,0,0,0.578775534266688,2.62357900818653,0,0.30982349809975,0,10.1822060064877,35.1731566826974,0,0,0.211107635297664,1.97576935775941,4.9331512589543,3.14941248220485,0.384888450902048,0.670302275535787,0,72.8673018012271,33.1489136956847,1.68471475667626,37.2481328970808,130.942338117967,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.84699191581699,0,0.33307196799782,0,0,12.5997034173829,0,0,10.2289012850309,844.43924251721,338.539736149208,617.393011219457,4.97073823883149,1.82870241333667,0.111308705022906,0,59.7484905002221,12.9511192363195,0.276283915531148,8.56571342704538,0,0,0,0,0,0,11.3439916482474,0,0,1.93866549219044,5.65885398787293,1.99613798001194,0,0,3.62499787717397,0.796554137998498,1.5255219017566,0.236387681767936,2.41320361269025,0,0,15.9433449446491,1.5677537021303,0,6.7453348558047,3.84211904639612,7.02033270892712,0,0,21.7769231565746,0,50.9546228697613,0,0.108647371922008,8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| |||
|short_description=p5@IGF2 | |||
}} |
Latest revision as of 07:49, 17 September 2015
Short description: | p5@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -484bp_to_AF318382_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P09565 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.88e-10 | 19 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.69e-17 | 114 |
organ system subdivision | 1.35e-15 | 223 |
extraembryonic membrane | 2.91e-12 | 14 |
membranous layer | 2.91e-12 | 14 |
endoderm-derived structure | 1.36e-11 | 160 |
endoderm | 1.36e-11 | 160 |
presumptive endoderm | 1.36e-11 | 160 |
cell layer | 3.32e-10 | 309 |
epithelium | 5.64e-10 | 306 |
extraembryonic structure | 3.47e-09 | 24 |
mesenchyme | 1.03e-08 | 160 |
entire embryonic mesenchyme | 1.03e-08 | 160 |
neural plate | 1.65e-08 | 82 |
presumptive neural plate | 1.65e-08 | 82 |
renal system | 7.79e-08 | 48 |
digestive system | 1.05e-07 | 145 |
digestive tract | 1.05e-07 | 145 |
primitive gut | 1.05e-07 | 145 |
urinary system structure | 1.19e-07 | 47 |
brain | 1.94e-07 | 68 |
future brain | 1.94e-07 | 68 |
ectoderm-derived structure | 2.00e-07 | 171 |
ectoderm | 2.00e-07 | 171 |
presumptive ectoderm | 2.00e-07 | 171 |
neurectoderm | 2.04e-07 | 86 |
central nervous system | 3.05e-07 | 81 |
neural tube | 3.25e-07 | 56 |
neural rod | 3.25e-07 | 56 |
future spinal cord | 3.25e-07 | 56 |
neural keel | 3.25e-07 | 56 |
chorion | 3.55e-07 | 7 |
subdivision of digestive tract | 4.94e-07 | 118 |
embryo | 6.30e-07 | 592 |