FFCP PHASE1:Hg19::chr12:12938328..12938349,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81575 | |EntrezGene=81575 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25268 | |HGNC=25268 | ||
|TSSclassifier=strong | |||
|UniProt=A0AVN6,Q96LR9 | |UniProt=A0AVN6,Q96LR9 | ||
|association_with_transcript=-191bp_to_ENST00000356591,NM_030817,uc001raw.3_5end | |association_with_transcript=-191bp_to_ENST00000356591,NM_030817,uc001raw.3_5end | ||
|cluster_id=chr12:12938328..12938349,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_9_at_APOLD1_5end | |description=CAGE_peak_9_at_APOLD1_5end | ||
|id=chr12:12938328..12938349,+ | |id=chr12:12938328..12938349,+ | ||
|ontology_enrichment_celltype=CL:0000148!3.87e-17!10;CL:0000541!3.87e-17!10;CL:0000147!5.16e-16!14;CL:0000710!4.24e-14!20;CL:0002594!4.79e-11!4;CL:0000075!4.30e-10!27;CL:0002077!5.14e-08!33;CL:0002567!1.76e-07!3;CL:0000133!5.07e-07!59;CL:0000064!5.99e-07!3;CL:0005012!5.99e-07!3;CL:0000067!5.99e-07!3;CL:0002304!5.99e-07!3 | |ontology_enrichment_celltype=CL:0000148!3.87e-17!10;CL:0000541!3.87e-17!10;CL:0000147!5.16e-16!14;CL:0000710!4.24e-14!20;CL:0002594!4.79e-11!4;CL:0000075!4.30e-10!27;CL:0002077!5.14e-08!33;CL:0002567!1.76e-07!3;CL:0000133!5.07e-07!59;CL:0000064!5.99e-07!3;CL:0005012!5.99e-07!3;CL:0000067!5.99e-07!3;CL:0002304!5.99e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;5.07e-101;10!CL:0000147;2.34e-72;14!CL:0000710;7.76e-51;20!CL:0002567;1.49e-38;3!CL:0000075;8.48e-38;27!CL:0002566;1.15e-29;1!CL:0002077;3.79e-28;34!CL:0000149;2.43e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.02e-101,10;CL:0000541,6.02e-101,10;CL:0000147,2.65e-72,14;CL:0000710,8.47e-51,20;CL:0002567,1.80e-38,3;CL:0000075,9.04e-38,27;CL:0002077,4.29e-30,34;CL:0002566,9.99e-30,1;CL:0000333,6.92e-24,41;CL:0000133,6.05e-17,59;CL:0000221,5.08e-14,72;CL:0000149,2.43e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000133;2.43e-09;59!CL:0000221;7.02e-08;72 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001310!4.79e-11!4;UBERON:0000488!1.11e-10!4;UBERON:0002360!1.09e-09!2;UBERON:0000094!1.09e-09!2;UBERON:0007645!1.09e-09!2;UBERON:0002346!7.45e-09!90;UBERON:0002203!2.90e-07!6;UBERON:0001768!2.90e-07!6;UBERON:0001896!5.48e-07!3;UBERON:0005290!5.48e-07!3;UBERON:0010096!5.48e-07!3;UBERON:0001778!5.99e-07!3;UBERON:0001775!5.99e-07!3;UBERON:0003075!6.28e-07!86;UBERON:0007284!6.28e-07!86 | |ontology_enrichment_uberon=UBERON:0001310!4.79e-11!4;UBERON:0000488!1.11e-10!4;UBERON:0002360!1.09e-09!2;UBERON:0000094!1.09e-09!2;UBERON:0007645!1.09e-09!2;UBERON:0002346!7.45e-09!90;UBERON:0002203!2.90e-07!6;UBERON:0001768!2.90e-07!6;UBERON:0001896!5.48e-07!3;UBERON:0005290!5.48e-07!3;UBERON:0010096!5.48e-07!3;UBERON:0001778!5.99e-07!3;UBERON:0001775!5.99e-07!3;UBERON:0003075!6.28e-07!86;UBERON:0007284!6.28e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002021;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.04e-07,5 | |||
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| ||
|short_description=p9@APOLD1 | |short_description=p9@APOLD1 | ||
}} | }} |
Latest revision as of 07:53, 17 September 2015
Short description: | p9@APOLD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_APOLD1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -191bp_to_ENST00000356591, NM_030817, uc001raw.3_5end |
EntrezGene: | APOLD1 |
HGNC: | 25268 |
UniProt: | A0AVN6Q96LR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.02e-101 | 10 |
melanoblast | 6.02e-101 | 10 |
pigment cell | 2.65e-72 | 14 |
neurecto-epithelial cell | 8.47e-51 | 20 |
light melanocyte | 1.80e-38 | 3 |
columnar/cuboidal epithelial cell | 9.04e-38 | 27 |
ecto-epithelial cell | 4.29e-30 | 34 |
dark melanocyte | 9.99e-30 | 1 |
migratory neural crest cell | 6.92e-24 | 41 |
neurectodermal cell | 6.05e-17 | 59 |
ectodermal cell | 5.08e-14 | 72 |
visual pigment cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 6.04e-07 | 5 |