FFCP PHASE1:Hg19::chr11:2154790..2154814,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=89bp_to_uc001lvf.2_5end | |association_with_transcript=89bp_to_uc001lvf.2_5end | ||
|cluster_id=chr11:2154790..2154814,- | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_24_at_IGF2_5end | |description=CAGE_peak_24_at_IGF2_5end | ||
|id=chr11:2154790..2154814,- | |id=chr11:2154790..2154814,- | ||
|ontology_enrichment_celltype=CL:0000349;4.67e-13;19!CL:0002537;1.66e-07;5 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000349;4.67e-13;19!CL:0002537;1.66e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.19e-13,19;CL:0002537,1.91e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0005631;3.74e-14;10!UBERON:0000158;3.74e-14;10!UBERON:0000478;9.27e-13;24!UBERON:0000305;3.91e-10;7!UBERON:0002107;1.07e-07;19!UBERON:0006925;1.07e-07;19!UBERON:0001987;6.70e-07;4!UBERON:0005409;8.83e-07;22 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.14e-13!14;UBERON:0000158!2.14e-13!14;UBERON:0007023!3.33e-11!115;UBERON:0000468!4.27e-09!659;UBERON:0000481!4.44e-09!347;UBERON:0000478!1.23e-08!24;UBERON:0004119!3.24e-08!169;UBERON:0000925!3.24e-08!169;UBERON:0006595!3.24e-08!169;UBERON:0003124!8.57e-08!7;UBERON:0000062!1.22e-07!511;UBERON:0001046!2.38e-07!19;UBERON:0000922!2.42e-07!612;UBERON:0000305!3.21e-07!7;UBERON:0004923!7.22e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.74e-14;10!UBERON:0000158;3.74e-14;10!UBERON:0000478;9.27e-13;24!UBERON:0000305;3.91e-10;7!UBERON:0002107;1.07e-07;19!UBERON:0006925;1.07e-07;19!UBERON:0001987;6.70e-07;4!UBERON:0005409;8.83e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.38e-19,14;UBERON:0000158,2.38e-19,14;UBERON:0000478,1.03e-12,24;UBERON:0003124,6.22e-11,7;UBERON:0000305,4.49e-10,7;UBERON:0004119,6.81e-09,160;UBERON:0000925,6.81e-09,160;UBERON:0006595,6.81e-09,160;UBERON:0004871,1.35e-08,8;UBERON:0004923,3.34e-08,66;UBERON:0002107,1.04e-07,19;UBERON:0006925,1.04e-07,19;UBERON:0008836,1.04e-07,19;UBERON:0001987,6.80e-07,4;UBERON:0004340,6.80e-07,4;UBERON:0003104,9.39e-07,160;UBERON:0009142,9.39e-07,160 | |||
|phase1_expression=3.99692434395225,1.92690471501885,0.845726424575827,7.00513088471913,4.91657203870017,4.36169262050184,0,0,0,0,1.39560233594486,29.9264679818336,28.2230666704445,0.866364470720326,2.65117900582333,0,0,0,0,0.246242116153576,3.26401105990805,1.25381888591235,0,0,0.125542639594803,0,0,0,0,0,6.03782880932696,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,1.88300474649071,0,0,0.189069634328136,0,0.351339142772504,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37559020970034,0,0,0,0.33472061276467,0,0,0,0,2.43042584364528,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0,0.538842688278752,0,6.50836938873205,8.64263886719998,0.234321431833797,0,0,0,0,0,0,0,0.245668634623536,0,14.2560342873846,13.3524141810421,0,0,0,1.00094815897571,0,0.438977620880838,0.612975591598039,3.75595147266492,0,0,0.427114777637135,0,0,0,0,0,0,0,0,0,2.58633690910099,0,0,0,0,0,0,0.243947412259191,0,3.137236457477,1.96956004529204,0.756962552626885,0,0,0,0,7.42988684851167,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,5.07020139287323,3.9313088667105,5.90789906681404,0,29.7632021274335,0,0,0,0,1.94435734832912,0.325808305310325,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0.448524337381443,3.48768055066624,0.1466765716419,0,3.57656445851882,0,3.45719551560332,2.08014873822732,1.80045161983499,0,1.3321108950805,3.0025378668211,60.7736198038416,0,0,1.42156779497018,0.791951872933429,0,0,0,0,0,0,0,0,0,1.01346914667305,1.84928690295345,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,8.58840442033979,2.50085260529839,1.08506009479894,4.57535895367776,4.63915370872621,3.15404830067869,5.03708084468667,1.80567659836631,2.27407504055985,7.24311499047534,0,0.184369168541703,0,65.2017854350926,103.286170567068,0,0,0,18.1876542867756,68.2385301993038,40.8226895995068,0.992431231275107,0.306923946576125,0.561320188866147,0.384417447767103,4.09365799253363,1.12597744800525,0,0,0,0,0.519254429183621,0,49.91495268134,2.40607764363942,0.552485933615378,2.06666006696292,0.728364672026868,3.93373244878272,0.451199612907412,0.462092022626489,0,0,0,0,0,0.863663664408557,7.71136263451447,4.87703587578935,3.51182841698397,0,0,0.223874754722178,0.219259876645935,0,0,0,0,8.24328093181778,0.27470839445503,0,0,0,0,1.06337790121334,0.308097234229289,0.460511024178389,0.689182862422653,0,0.870100163485371,0.767039646744908,18.6967274858148,0.991709492165869,1.92190067365106,0,0.4046311234222,0,0,0,0,0,0,0,0,1.116475108079,1.2655176988749,2.09693213316207,0.767693373934002,2.1396949401696,0,0,2.33834194858309,1.37268514868027,1.17812402345686,0,0,0,2.43816869544795,0,0,3.8219975194236,0.141405431953713,0,0,0,0,0,0,0,0,0,0.430234056612155,1.47373561519682,0,0,0,0,0.379473173765715,1.04980416073495,0.0962221127255121,0.670302275535787,0,7.43736026136555,3.87454835404107,0,3.10401107475673,5.05391480455311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22317994398167,0,0,1.42068073403207,69.7133895434055,84.634934037302,74.9472113122126,0.994147647766298,0.281338832821026,0,0,0.844501632511974,1.19548792950642,0.276283915531148,0,0,0,0,0,0,0,2.26879832964947,0,0,0,0.556608588971108,0,0,0,3.62499787717397,0,0,0,0,0,0,0,0.241192877250816,0,0.331737779793674,0,1.75508317723178,0,0,4.46311499322023,0,5.53353370531344,0,0,57.7392099114774,18.5943114605781,202.553214887081,0,0,0,0,0,0,0,0,0,0,1.97894300007517,0,0,1.23840590304675,1.22206028986725,0,0,0,0.067401132980677,27.2876400081588,0.234264445725339,0,0,0,0.394584402849391,4.83962864194656,0.61214552326098,7.26645665727612,0,0,0,0,0,0,0,0.138674673013139,0,0,0,6.11543338847105,0,0,0,0.0821154570532092,1.16386819786103,0.353024506766001,6.32746074185491,0,0,0.126621591911757,0,0,0.85381197895741,25.5756300265127,0,0,64.3481241982367,0,0,0,0,0,0.509991088181609,0,0,0,0,0,0,1.95497680890578,0.916641696046735,1.43574604915363,0.998395002494955,0.858452096273142,0.89268582976749,3.35917362433631,0,0,15.5990700968303,12.2799628987938,18.1315532967757,15.3546871163008,0,0,0.136203406111576,0,0,0,0,0,0,0,0.472834243795189,2.09818352539992,0.105600336519406,0,0,2.85878130549347,1.32418394073086,0,0,0,0,0,0,0,0.339936274560377,8.50002955332878,9.27548222385549,0.387848869084652,0,0,0,0.533937062838473,2.67247318669432,0,0.496166021811951,0,0,0,0,0.5013797880454,0.306345576763462,0.655745261419609,0,0,0.244052529803926,0.250381861413,2.86704597845036,0.443716206147409,0.124192805882767,0,0.249960815924213,0,0,1.17632909849086,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34940933649081,0,0,0,2.60872530905867,0,0,0.406870733204662,0,0.107410557042488,0,4.37905477568478,7.200499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| ||
|short_description=p24@IGF2 | |short_description=p24@IGF2 | ||
}} | }} |
Latest revision as of 08:03, 17 September 2015
Short description: | p24@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 89bp_to_uc001lvf.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.19e-13 | 19 |
amnion mesenchymal stem cell | 1.91e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.38e-19 | 14 |
membranous layer | 2.38e-19 | 14 |
extraembryonic structure | 1.03e-12 | 24 |
chorion | 6.22e-11 | 7 |
amnion | 4.49e-10 | 7 |
endoderm-derived structure | 6.81e-09 | 160 |
endoderm | 6.81e-09 | 160 |
presumptive endoderm | 6.81e-09 | 160 |
somatic layer of lateral plate mesoderm | 1.35e-08 | 8 |
organ component layer | 3.34e-08 | 66 |
liver | 1.04e-07 | 19 |
digestive gland | 1.04e-07 | 19 |
liver bud | 1.04e-07 | 19 |
placenta | 6.80e-07 | 4 |
allantois | 6.80e-07 | 4 |
mesenchyme | 9.39e-07 | 160 |
entire embryonic mesenchyme | 9.39e-07 | 160 |