FFCP PHASE1:Hg19::chr11:2156751..2156773,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=0bp_to_AB528666,BT007013,CU674260,DQ892721,DQ895970_5end | |association_with_transcript=0bp_to_AB528666,BT007013,CU674260,DQ892721,DQ895970_5end | ||
|cluster_id=chr11:2156751..2156773,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_55_at_IGF2_5end | |description=CAGE_peak_55_at_IGF2_5end | ||
|id=chr11:2156751..2156773,- | |id=chr11:2156751..2156773,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;7.61e-21;19!CL:0002541;1.13e-13;3!CL:0002575;5.31e-10;2!CL:0002536;1.13e-09;2!CL:0002537;2.40e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.77e-21,19;CL:0002541,1.66e-13,3;CL:0002575,5.44e-10,2;CL:0002536,1.09e-09,2;CL:0002537,2.89e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.39e-09;11!UBERON:0009497;9.80e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.56e-14!14;UBERON:0000158!6.56e-14!14;UBERON:0000478!1.61e-09!24;UBERON:0004119!7.13e-09!169;UBERON:0000925!7.13e-09!169;UBERON:0006595!7.13e-09!169;UBERON:0003124!7.86e-08!7;UBERON:0000305!1.08e-07!7;UBERON:0001046!4.60e-07!19;UBERON:0004921!7.26e-07!129;UBERON:0004185!7.26e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.63e-26;10!UBERON:0000158;1.63e-26;10!UBERON:0000478;3.50e-23;24!UBERON:0000305;2.54e-15;7!UBERON:0003124;1.13e-13;3!UBERON:0000920;1.13e-13;3!UBERON:0000922;9.60e-09;49!UBERON:0002107;3.42e-07;19!UBERON:0006925;3.42e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.20e-28,14;UBERON:0000158,1.20e-28,14;UBERON:0000478,3.66e-23,24;UBERON:0000305,3.09e-15,7;UBERON:0003124,4.53e-15,7;UBERON:0000920,1.66e-13,3;UBERON:0004871,2.70e-13,8;UBERON:0002107,2.78e-07,19;UBERON:0006925,2.78e-07,19;UBERON:0008836,2.78e-07,19 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,3.49506195408276,4.74780560811216,0.247532705920093,0.662794751455832,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0.207322110030741,0.252320850875628,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,2.7057456479485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30788020649984,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0.57191197463259,4.88359444852299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0.542530047399471,1.24782516918484,0.535286966391485,0.630809660135739,0.585707074963566,0.300946099727719,0,0,0,0.184369168541703,0,7.04884166865866,9.26487244289311,0,0,0,0.606255142892519,0,3.93107381328584,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,2.05461064305758,0.40101294060657,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,1.15741646340759,0,0.192190067365106,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,1.28381696410176,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.545999645631943,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0.564862804660675,1.29151611801369,0,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,8.35605696581915,1.18785872333055,10.1363031692747,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.230850775511391,0,0.69169171316418,0,0,8.61303131276183,1.09917112082235,28.2508431289876,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.176915129006678,0,0,0,0,0.067401132980677,8.02577647298789,0,0,0,0,0,2.41981432097328,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264768380074501,0.90392296312213,0,0,0.0633107959558787,0,0,0,2.99714414373195,0,0,6.86379991447858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,1.41085292222125,0.360299883542404,0,1.6544468284517,1.89556474276683,3.1005630172925,1.57483970423598,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.944182586429966,0.211200673038813,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0.226624183040251,0.732761168390412,25.1763088933221,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13503190713367,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0.397832444232549,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,1.95145214357805,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0.840816489941367,3.65263488203798,0,0,0.571812353413251,0,0,4.52031507986707,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0.731507549893617,0,0.410651227424988,10.4383298820438,1.94284397223656,0,1.59160620129095,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0.235676547101626,0.196308467114945,0.297046400327086,2.113278637917,0,0,0.322289439867886,0,0,0,0,0.730336388246517,0,0,0.157771562193185,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0.36757959813938,0,0.0757786982182394,0,0,0,0,3.33290204049236,0.0645889098360061,0.372448285775147,0,0.0636471582781649,1.21270313374932,0.217716747896961,7.87136592496146,0.134704106029175,0.358611026963382,3.32660356546013,0.244209805832924,0,0,1.88632924423832,4.69281884806909,0.244482888365733,2.84827324821017,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,3.49506195408276,4.74780560811216,0.247532705920093,0.662794751455832,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0.207322110030741,0.252320850875628,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,2.7057456479485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30788020649984,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0.57191197463259,4.88359444852299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0.542530047399471,1.24782516918484,0.535286966391485,0.630809660135739,0.585707074963566,0.300946099727719,0,0,0,0.184369168541703,0,7.04884166865866,9.26487244289311,0,0,0,0.606255142892519,0,3.93107381328584,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,2.05461064305758,0.40101294060657,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,1.15741646340759,0,0.192190067365106,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,1.28381696410176,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.545999645631943,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0.564862804660675,1.29151611801369,0,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,8.35605696581915,1.18785872333055,10.1363031692747,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.230850775511391,0,0.69169171316418,0,0,8.61303131276183,1.09917112082235,28.2508431289876,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.176915129006678,0,0,0,0,0.067401132980677,8.02577647298789,0,0,0,0,0,2.41981432097328,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264768380074501,0.90392296312213,0,0,0.0633107959558787,0,0,0,2.99714414373195,0,0,6.86379991447858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,1.41085292222125,0.360299883542404,0,1.6544468284517,1.89556474276683,3.1005630172925,1.57483970423598,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.944182586429966,0.211200673038813,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0.226624183040251,0.732761168390412,25.1763088933221,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13503190713367,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0.397832444232549,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,1.95145214357805,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0.840816489941367,3.65263488203798,0,0,0.571812353413251,0,0,4.52031507986707,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0.731507549893617,0,0.410651227424988,10.4383298820438,1.94284397223656,0,1.59160620129095,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0.235676547101626,0.196308467114945,0.297046400327086,2.113278637917,0,0,0.322289439867886,0,0,0,0,0.730336388246517,0,0,0.157771562193185,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0.36757959813938,0,0.0757786982182394,0,0,0,0,3.33290204049236,0.0645889098360061,0.372448285775147,0,0.0636471582781649,1.21270313374932,0.217716747896961,7.87136592496146,0.134704106029175,0.358611026963382,3.32660356546013,0.244209805832924,0,0,1.88632924423832,4.69281884806909,0.244482888365733,2.84827324821017,0.665756774185513,0.201273793591026,0 | ||
|short_description=p55@IGF2 | |short_description=p55@IGF2 | ||
}} | }} |
Latest revision as of 08:09, 17 September 2015
Short description: | p55@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_55_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 0bp_to_AB528666, BT007013, CU674260, DQ892721, DQ895970_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.77e-21 | 19 |
chorionic membrane mesenchymal stem cell | 1.66e-13 | 3 |
central nervous system pericyte | 5.44e-10 | 2 |
amniotic epithelial cell | 1.09e-09 | 2 |
amnion mesenchymal stem cell | 2.89e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.20e-28 | 14 |
membranous layer | 1.20e-28 | 14 |
extraembryonic structure | 3.66e-23 | 24 |
amnion | 3.09e-15 | 7 |
chorion | 4.53e-15 | 7 |
egg chorion | 1.66e-13 | 3 |
somatic layer of lateral plate mesoderm | 2.70e-13 | 8 |
liver | 2.78e-07 | 19 |
digestive gland | 2.78e-07 | 19 |
liver bud | 2.78e-07 | 19 |