FFCP PHASE1:Hg19::chr11:2159491..2159532,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5466 | |||
|TSSclassifier=strong | |||
|UniProt=P01344 | |||
|association_with_transcript=-18bp_to_X06159_5end | |||
|cluster_id=chr11:2159491..2159532,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_23_at_IGF2_5end | |||
|id=chr11:2159491..2159532,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.97e-12;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.82e-12,19 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.11e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.55e-14!169;UBERON:0000925!2.55e-14!169;UBERON:0006595!2.55e-14!169;UBERON:0000481!4.02e-14!347;UBERON:0005631!2.64e-12!14;UBERON:0000158!2.64e-12!14;UBERON:0007023!5.37e-11!115;UBERON:0000468!2.25e-10!659;UBERON:0001007!5.70e-10!155;UBERON:0001555!5.70e-10!155;UBERON:0007026!5.70e-10!155;UBERON:0002100!1.26e-09!216;UBERON:0000478!2.86e-09!24;UBERON:0000475!4.86e-09!365;UBERON:0004921!5.38e-09!129;UBERON:0004185!5.38e-09!129;UBERON:0003104!1.27e-08!238;UBERON:0009142!1.27e-08!238;UBERON:0000062!1.73e-08!511;UBERON:0000922!1.87e-08!612;UBERON:0000064!5.61e-08!219;UBERON:0000077!7.79e-08!130;UBERON:0001046!1.01e-07!19;UBERON:0004923!1.37e-07!57;UBERON:0002050!1.52e-07!605;UBERON:0005423!1.52e-07!605;UBERON:0000923!2.97e-07!604;UBERON:0005291!2.97e-07!604;UBERON:0006598!2.97e-07!604;UBERON:0002532!2.97e-07!604;UBERON:0000161!3.80e-07!35;UBERON:0003124!4.86e-07!7;UBERON:0005256!5.28e-07!143;UBERON:0000305!7.26e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.41e-12;10!UBERON:0000158;4.41e-12;10!UBERON:0000478;1.41e-11;24!UBERON:0000160;1.99e-09;17!UBERON:0005409;5.75e-09;22!UBERON:0000305;7.77e-09;7!UBERON:0004921;5.04e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.95e-16,14;UBERON:0000158,2.95e-16,14;UBERON:0004119,5.12e-13,160;UBERON:0000925,5.12e-13,160;UBERON:0006595,5.12e-13,160;UBERON:0000478,1.36e-11,24;UBERON:0000160,1.60e-09,17;UBERON:0003124,4.60e-09,7;UBERON:0000305,7.94e-09,7;UBERON:0004923,2.13e-08,66;UBERON:0005409,2.14e-08,25;UBERON:0001008,2.14e-08,48;UBERON:0003104,3.56e-08,160;UBERON:0009142,3.56e-08,160;UBERON:0001007,4.39e-08,145;UBERON:0001555,4.39e-08,145;UBERON:0007026,4.39e-08,145;UBERON:0001046,8.34e-08,19;UBERON:0006554,9.17e-08,47;UBERON:0004921,1.08e-07,118;UBERON:0004871,1.82e-07,8;UBERON:0000059,8.04e-07,11 | |||
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| |||
|short_description=p23@IGF2 | |||
}} |
Latest revision as of 08:11, 17 September 2015
Short description: | p23@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -18bp_to_X06159_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.82e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.95e-16 | 14 |
membranous layer | 2.95e-16 | 14 |
endoderm-derived structure | 5.12e-13 | 160 |
endoderm | 5.12e-13 | 160 |
presumptive endoderm | 5.12e-13 | 160 |
extraembryonic structure | 1.36e-11 | 24 |
intestine | 1.60e-09 | 17 |
chorion | 4.60e-09 | 7 |
amnion | 7.94e-09 | 7 |
organ component layer | 2.13e-08 | 66 |
gastrointestinal system | 2.14e-08 | 25 |
renal system | 2.14e-08 | 48 |
mesenchyme | 3.56e-08 | 160 |
entire embryonic mesenchyme | 3.56e-08 | 160 |
digestive system | 4.39e-08 | 145 |
digestive tract | 4.39e-08 | 145 |
primitive gut | 4.39e-08 | 145 |
hindgut | 8.34e-08 | 19 |
urinary system structure | 9.17e-08 | 47 |
subdivision of digestive tract | 1.08e-07 | 118 |
somatic layer of lateral plate mesoderm | 1.82e-07 | 8 |
large intestine | 8.04e-07 | 11 |