FFCP PHASE1:Hg19::chr11:2159808..2159810,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=393bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | |association_with_transcript=393bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | ||
|cluster_id=chr11:2159808..2159810,- | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_62_at_IGF2_5end | |description=CAGE_peak_62_at_IGF2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!1.98e-07!3 | |ontology_enrichment_celltype=CL:0002541!1.98e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;6.90e-41;19!CL:0002536;6.73e-17;2!CL:0002537;2.25e-15;5!CL:0002541;8.14e-12;3!CL:0002577;1.09e-11;3 | |ontology_enrichment_celltype_v019=CL:0000349;6.90e-41;19!CL:0002536;6.73e-17;2!CL:0002537;2.25e-15;5!CL:0002541;8.14e-12;3!CL:0002577;1.09e-11;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.73e-41,19;CL:0002536,9.68e-17,2;CL:0002537,2.37e-15,5;CL:0002541,8.83e-12,3;CL:0002577,9.32e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.08e-11;11!UBERON:0009497;6.40e-10;13!UBERON:0000358;1.83e-09;1 | |ontology_enrichment_development_v019=UBERON:0004161;1.08e-11;11!UBERON:0009497;6.40e-10;13!UBERON:0000358;1.83e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.46e-18!14;UBERON:0000158!6.46e-18!14;UBERON:0000478!2.59e-13!24;UBERON:0003124!2.38e-11!7;UBERON:0000305!2.44e-08!7;UBERON:0000476!1.98e-07!3;UBERON:0000920!1.98e-07!3;UBERON:0004871!3.22e-07!8 | |ontology_enrichment_uberon=UBERON:0005631!6.46e-18!14;UBERON:0000158!6.46e-18!14;UBERON:0000478!2.59e-13!24;UBERON:0003124!2.38e-11!7;UBERON:0000305!2.44e-08!7;UBERON:0000476!1.98e-07!3;UBERON:0000920!1.98e-07!3;UBERON:0004871!3.22e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;7.64e-39;24!UBERON:0005631;7.64e-39;10!UBERON:0000158;7.64e-39;10!UBERON:0000305;8.88e-29;7!UBERON:0003124;8.14e-12;3!UBERON:0000920;8.14e-12;3!UBERON:0001987;5.51e-09;4!UBERON:0002107;7.87e-07;19!UBERON:0006925;7.87e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0000478;7.64e-39;24!UBERON:0005631;7.64e-39;10!UBERON:0000158;7.64e-39;10!UBERON:0000305;8.88e-29;7!UBERON:0003124;8.14e-12;3!UBERON:0000920;8.14e-12;3!UBERON:0001987;5.51e-09;4!UBERON:0002107;7.87e-07;19!UBERON:0006925;7.87e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.52e-45,14;UBERON:0000158,3.52e-45,14;UBERON:0000478,9.38e-39,24;UBERON:0000305,1.22e-28,7;UBERON:0004871,4.68e-25,8;UBERON:0003124,1.00e-18,7;UBERON:0000920,8.83e-12,3;UBERON:0004923,1.36e-10,66;UBERON:0001987,4.89e-09,4;UBERON:0004340,4.89e-09,4;UBERON:0002107,7.94e-07,19;UBERON:0006925,7.94e-07,19;UBERON:0008836,7.94e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,1.09220686065086,2.11013582582763,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72183813960359,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,3.25572963234866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0,0,0.979005787313703,3.43143423810856,0,0,0,0,1.66435439510497,3.32629322662648,0,0,0,0.128139149255701,0,0,0,0,0,0,0.519254429183621,0,1.81289174387433,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0.801288320820636,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3874448473769,2.07875276582847,6.14321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0,0,1.27600463892768,0.274792780205587,12.2597998484286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0.213452994739353,0.799238438328521,0,0,3.94668495082519,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.268733889946905,0,0,1.10296455230113,1.40106959247983,1.3480708770837,0.885847333632739,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79832133146375,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.285906176706625,0,0,1.04314963381548,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0.243835849964539,0,0,5.799072156691,0.971421986118279,0,1.59160620129095,0,0,0,0,0,0.218559560503957,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0,1.0580536810308,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.714193294391221,0,0,0,0,0.404234377916439,0.217716747896961,5.13349951627922,0,0,0.332660356546013,0.0814032686109745,0,0,0.0898252021065869,2.34640942403454,0,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,1.09220686065086,2.11013582582763,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72183813960359,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,3.25572963234866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0,0,0.979005787313703,3.43143423810856,0,0,0,0,1.66435439510497,3.32629322662648,0,0,0,0.128139149255701,0,0,0,0,0,0,0.519254429183621,0,1.81289174387433,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0.801288320820636,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3874448473769,2.07875276582847,6.14321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0,0,1.27600463892768,0.274792780205587,12.2597998484286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0.213452994739353,0.799238438328521,0,0,3.94668495082519,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.268733889946905,0,0,1.10296455230113,1.40106959247983,1.3480708770837,0.885847333632739,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79832133146375,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.285906176706625,0,0,1.04314963381548,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0.243835849964539,0,0,5.799072156691,0.971421986118279,0,1.59160620129095,0,0,0,0,0,0.218559560503957,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0,1.0580536810308,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.714193294391221,0,0,0,0,0.404234377916439,0.217716747896961,5.13349951627922,0,0,0.332660356546013,0.0814032686109745,0,0,0.0898252021065869,2.34640942403454,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p62@IGF2 | |short_description=p62@IGF2 | ||
}} | }} |
Latest revision as of 08:22, 17 September 2015
Short description: | p62@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_62_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 393bp_to_ENST00000381406, NM_000612, uc001lvg.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.73e-41 | 19 |
amniotic epithelial cell | 9.68e-17 | 2 |
amnion mesenchymal stem cell | 2.37e-15 | 5 |
chorionic membrane mesenchymal stem cell | 8.83e-12 | 3 |
placental epithelial cell | 9.32e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.52e-45 | 14 |
membranous layer | 3.52e-45 | 14 |
extraembryonic structure | 9.38e-39 | 24 |
amnion | 1.22e-28 | 7 |
somatic layer of lateral plate mesoderm | 4.68e-25 | 8 |
chorion | 1.00e-18 | 7 |
egg chorion | 8.83e-12 | 3 |
organ component layer | 1.36e-10 | 66 |
placenta | 4.89e-09 | 4 |
allantois | 4.89e-09 | 4 |
liver | 7.94e-07 | 19 |
digestive gland | 7.94e-07 | 19 |
liver bud | 7.94e-07 | 19 |