FFCP PHASE1:Hg19::chr11:2159824..2159832,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=371bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | |association_with_transcript=371bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | ||
|cluster_id=chr11:2159824..2159832,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_39_at_IGF2_5end | |description=CAGE_peak_39_at_IGF2_5end | ||
|id=chr11:2159824..2159832,- | |id=chr11:2159824..2159832,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.47e-24;19!CL:0002541;2.46e-11;3!CL:0002577;3.41e-11;3!CL:0002575;3.14e-08;2!CL:0002536;4.86e-08;2!CL:0002537;4.23e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.75e-24,19;CL:0002541,2.59e-11,3;CL:0002577,3.65e-11,3;CL:0002575,3.20e-08,2;CL:0002536,5.04e-08,2;CL:0002537,4.24e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.31e-08;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.42e-13!14;UBERON:0000158!5.42e-13!14;UBERON:0000478!6.16e-10!24;UBERON:0003124!7.22e-10!7;UBERON:0006554!8.85e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.13e-25;24!UBERON:0005631;1.00e-21;10!UBERON:0000158;1.00e-21;10!UBERON:0001987;2.65e-14;4!UBERON:0000305;1.06e-12;7!UBERON:0003124;2.46e-11;3!UBERON:0000920;2.46e-11;3!UBERON:0000922;4.37e-09;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.44e-34,14;UBERON:0000158,6.44e-34,14;UBERON:0000478,1.26e-25,24;UBERON:0003124,7.87e-24,7;UBERON:0001987,2.94e-14,4;UBERON:0004340,2.94e-14,4;UBERON:0000305,1.09e-12,7;UBERON:0000920,2.59e-11,3;UBERON:0004871,4.70e-11,8;UBERON:0004923,4.08e-07,66 | |||
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| ||
|short_description=p39@IGF2 | |short_description=p39@IGF2 | ||
}} | }} |
Latest revision as of 08:23, 17 September 2015
Short description: | p39@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 371bp_to_ENST00000381406, NM_000612, uc001lvg.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.75e-24 | 19 |
chorionic membrane mesenchymal stem cell | 2.59e-11 | 3 |
placental epithelial cell | 3.65e-11 | 3 |
central nervous system pericyte | 3.20e-08 | 2 |
amniotic epithelial cell | 5.04e-08 | 2 |
amnion mesenchymal stem cell | 4.24e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.44e-34 | 14 |
membranous layer | 6.44e-34 | 14 |
extraembryonic structure | 1.26e-25 | 24 |
chorion | 7.87e-24 | 7 |
placenta | 2.94e-14 | 4 |
allantois | 2.94e-14 | 4 |
amnion | 1.09e-12 | 7 |
egg chorion | 2.59e-11 | 3 |
somatic layer of lateral plate mesoderm | 4.70e-11 | 8 |
organ component layer | 4.08e-07 | 66 |