FFCP PHASE1:Hg19::chr11:2160043..2160076,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=127bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | |association_with_transcript=127bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | ||
|cluster_id=chr11:2160043..2160076,- | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_25_at_IGF2_5end | |description=CAGE_peak_25_at_IGF2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;4.43e-15;19!CL:0002537;1.15e-07;5 | |ontology_enrichment_celltype_v019=CL:0000349;4.43e-15;19!CL:0002537;1.15e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.66e-15,19;CL:0002537,1.24e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.07e-08;31 | |ontology_enrichment_development_v019=UBERON:0003104;3.07e-08;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.41e-13!14;UBERON:0000158!8.41e-13!14;UBERON:0000481!7.32e-11!347;UBERON:0007023!7.52e-11!115;UBERON:0004119!1.08e-10!169;UBERON:0000925!1.08e-10!169;UBERON:0006595!1.08e-10!169;UBERON:0000478!1.83e-09!24;UBERON:0002100!1.00e-08!216;UBERON:0000468!1.52e-08!659;UBERON:0003104!3.83e-08!238;UBERON:0009142!3.83e-08!238;UBERON:0001007!1.67e-07!155;UBERON:0001555!1.67e-07!155;UBERON:0007026!1.67e-07!155;UBERON:0003124!1.96e-07!7;UBERON:0004921!2.12e-07!129;UBERON:0004185!2.12e-07!129;UBERON:0005256!2.86e-07!143;UBERON:0001008!2.99e-07!45;UBERON:0000305!5.62e-07!7;UBERON:0000160!5.67e-07!27;UBERON:0005409!6.56e-07!35;UBERON:0001046!6.68e-07!19;UBERON:0000922!7.69e-07!612;UBERON:0006554!8.85e-07!44 | |ontology_enrichment_uberon=UBERON:0005631!8.41e-13!14;UBERON:0000158!8.41e-13!14;UBERON:0000481!7.32e-11!347;UBERON:0007023!7.52e-11!115;UBERON:0004119!1.08e-10!169;UBERON:0000925!1.08e-10!169;UBERON:0006595!1.08e-10!169;UBERON:0000478!1.83e-09!24;UBERON:0002100!1.00e-08!216;UBERON:0000468!1.52e-08!659;UBERON:0003104!3.83e-08!238;UBERON:0009142!3.83e-08!238;UBERON:0001007!1.67e-07!155;UBERON:0001555!1.67e-07!155;UBERON:0007026!1.67e-07!155;UBERON:0003124!1.96e-07!7;UBERON:0004921!2.12e-07!129;UBERON:0004185!2.12e-07!129;UBERON:0005256!2.86e-07!143;UBERON:0001008!2.99e-07!45;UBERON:0000305!5.62e-07!7;UBERON:0000160!5.67e-07!27;UBERON:0005409!6.56e-07!35;UBERON:0001046!6.68e-07!19;UBERON:0000922!7.69e-07!612;UBERON:0006554!8.85e-07!44 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;9.54e-15;24!UBERON:0005631;2.33e-14;10!UBERON:0000158;2.33e-14;10!UBERON:0000305;2.80e-10;7!UBERON:0005409;2.88e-08;22!UBERON:0000160;4.08e-08;17!UBERON:0000922;5.36e-08;49!UBERON:0000077;4.55e-07;27!UBERON:0001987;7.26e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000478;9.54e-15;24!UBERON:0005631;2.33e-14;10!UBERON:0000158;2.33e-14;10!UBERON:0000305;2.80e-10;7!UBERON:0005409;2.88e-08;22!UBERON:0000160;4.08e-08;17!UBERON:0000922;5.36e-08;49!UBERON:0000077;4.55e-07;27!UBERON:0001987;7.26e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.47e-19,14;UBERON:0000158,1.47e-19,14;UBERON:0000478,9.95e-15,24;UBERON:0003124,5.68e-11,7;UBERON:0000305,3.05e-10,7;UBERON:0004923,2.66e-09,66;UBERON:0004119,3.59e-09,160;UBERON:0000925,3.59e-09,160;UBERON:0006595,3.59e-09,160;UBERON:0001008,6.06e-09,48;UBERON:0004871,9.34e-09,8;UBERON:0003104,1.02e-08,160;UBERON:0009142,1.02e-08,160;UBERON:0006554,2.89e-08,47;UBERON:0000160,3.70e-08,17;UBERON:0005409,5.89e-08,25;UBERON:0001046,5.98e-07,19;UBERON:0004921,6.69e-07,118;UBERON:0001987,7.20e-07,4;UBERON:0004340,7.20e-07,4 | |||
|phase1_expression=1.45342703416445,1.07050261945492,0.281908808191942,1.0007329835313,1.78784437770915,1.74467704820074,0,0,0,0.245733936501509,0.697801167972428,15.0724546769819,18.4636884759917,1.48519623552056,1.32558950291166,0,0,0,0,0.123121058076788,1.83600622119828,0.313454721478088,0,0,0,0,0,0,0,0,0.77408061658038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01392563272577,0,0,0.472674085820339,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.550236083880135,0.208994966536811,0.258416759169329,0,1.33888245105868,0,0,0,0,1.62028389576352,0,0,0.112611480483322,0,0,0.366403487860815,0,0,0.872188104285069,0,0,0,0,0,0.560677600142307,0,0.74000264525148,0.311211035399766,0,0,4.99479511228274,8.64263886719998,0.937285727335186,0,0,0,0,0,0.280901613404497,0,0.122834317311768,0,7.12801714369232,4.20353779773547,0,0.718618141816238,0.673344455816265,0.500474079487857,0,3.07284334616587,0.30648779579902,0.901428353439581,0,0,0,0,0,0,0,0,0,0,0,0.276149695926898,0.161646056818812,0,0,0.169560592310488,0,0,0,0.121973706129595,0,1.04574548582567,0.932949495138334,0.252320850875628,0,0,0,0,4.64367928031979,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0.4115740113314,5.88034845542168,0,0,1.18157981336281,0,21.645965183588,0.171567810298526,0,0,0,0.555530670951178,1.3032332212413,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,5.23152082599936,0.1466765716419,0,0,0,3.45719551560332,2.08014873822732,0.771622122786426,4.25547396069835,0.266422179016099,2.85955987316295,44.4949716420983,2.46972101034231,0.325736184293735,2.13235169245527,0.791951872933429,0,0,0,0,0,0,0,0,0,1.15825045334063,1.02738161275192,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,4.53958519360818,1.50051156317903,1.35632511849868,1.24782516918484,1.96271887676878,2.05013139544115,1.63997980989798,0.902838299183157,0,4.1389228517002,0,0.553107505625109,0,39.3560326500109,54.9029478097369,0,0,0,10.3063374291728,13.3148351608398,28.7270778663196,0,0.306923946576125,0.280660094433074,0,1.53512174720011,0.160853921143607,0,0,0,0,0.519254429183621,0.116210378459959,43.8719802017589,1.60405176242628,0.368323955743585,1.26295892981067,0.546273504020151,1.31124414959424,0.451199612907412,0.231046011313244,0.784349769176855,0,0,0,0.340187410553031,1.0795795805107,3.08454505380579,2.98041081298238,4.01351819083883,0,0,0.223874754722178,0,0,0,0,0,12.3649213977267,0,0.082509499920588,0,0,0,0.96670718292122,0.154048617114644,0.307007349452259,0.964856007391714,0.322260734604821,0.580066775656914,0.0852266274161009,9.43739577855416,0.330569830721956,0.768760269460425,0,0.4046311234222,0,0.31481234683064,0,0,0,2.60979897622522,0,0.143124886741991,0.744316738719335,2.21465597303108,2.66882271493355,0.255897791311334,2.1396949401696,0,0,2.15846949099978,2.19629623788844,1.06031162111118,0,0,0,1.95053495635836,0,0,4.09499734223957,0.424216295861138,0,0,0,0,0,0,0,0,0,0.143411352204052,1.17898849215745,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,13.0859883079723,6.02707521739722,3.36942951335251,3.54744122829341,4.36474460393223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92349595790849,0,0,0,0,3.07667176470977,0,0,0.852408440419239,46.3164300391119,36.5266557424145,74.0257292059149,0,0,0,0,0.63337622438398,0.796991953004279,0.552567831062295,0.503865495708552,0,0,0.311039587661807,0,0,0,1.1837208676432,0,0,0,0.278304294485554,0,0,0,3.62499787717397,0.1137934482855,0,0,0.344743373241465,0,0,0.885741385813839,0,0,0.331737779793674,0.295547618953547,0.438770794307945,0,0,2.6932590476329,0,9.45312007991047,0,0,50.0831820779114,8.70177137317692,308.094100538771,0,0,0,0,0,0,0,0,0,0,3.25112064298064,0,0.995261931078505,0.530745387020035,17.7198742030751,0,0,0,0.202203398942031,48.1546588379273,0.468528891450678,0,0,0,0.789168805698781,10.8891644443797,0.91821828489147,3.09614240179591,0,0,0.664653872707185,0.330991955875499,0.313932918407225,1.19472429772959,0,0,0,0,0,5.94070672022902,0.171986032471617,0,0,0,0.581934098930517,0.264768380074501,8.58726814966023,0,0,0.316553979779393,0,0,0.85381197895741,5.39485945871752,0,0,61.4310092345833,0,0,0,0,0,0.407992870545287,0,0,0,0,0,0,2.79282401272254,2.06244381610515,3.58936512288407,1.59743200399193,2.14613024068285,1.33902874465124,5.50904474391155,1.08089965062721,0,18.671614206812,18.0490729854755,21.7713446649017,11.7128703002551,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.86686278029118,3.51445740504487,1.26720403823288,0,0,8.5763439164804,7.94510364438518,0,0,0.864221491201268,0,0,0,0,1.01980882368113,0.58620893471233,98.0550977950438,0.387848869084652,0.13223260174269,0,0,0.427149650270779,5.97376359378731,0,0,0,0,0,0,0.5013797880454,0,0.655745261419609,0,0,0.244052529803926,0,1.14681839138014,0.887432412294818,0.18628920882415,0,0,0,0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| ||
|short_description=p25@IGF2 | |short_description=p25@IGF2 | ||
}} | }} |
Latest revision as of 08:35, 17 September 2015
Short description: | p25@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 127bp_to_ENST00000381406, NM_000612, uc001lvg.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.66e-15 | 19 |
amnion mesenchymal stem cell | 1.24e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.47e-19 | 14 |
membranous layer | 1.47e-19 | 14 |
extraembryonic structure | 9.95e-15 | 24 |
chorion | 5.68e-11 | 7 |
amnion | 3.05e-10 | 7 |
organ component layer | 2.66e-09 | 66 |
endoderm-derived structure | 3.59e-09 | 160 |
endoderm | 3.59e-09 | 160 |
presumptive endoderm | 3.59e-09 | 160 |
renal system | 6.06e-09 | 48 |
somatic layer of lateral plate mesoderm | 9.34e-09 | 8 |
mesenchyme | 1.02e-08 | 160 |
entire embryonic mesenchyme | 1.02e-08 | 160 |
urinary system structure | 2.89e-08 | 47 |
intestine | 3.70e-08 | 17 |
gastrointestinal system | 5.89e-08 | 25 |
hindgut | 5.98e-07 | 19 |
subdivision of digestive tract | 6.69e-07 | 118 |
placenta | 7.20e-07 | 4 |
allantois | 7.20e-07 | 4 |