FFCP PHASE1:Hg19::chr11:2160117..2160121,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=82bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | |association_with_transcript=82bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | ||
|cluster_id=chr11:2160117..2160121,- | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_30_at_IGF2_5end | |description=CAGE_peak_30_at_IGF2_5end | ||
|id=chr11:2160117..2160121,- | |id=chr11:2160117..2160121,- | ||
|ontology_enrichment_celltype=CL:0000349;7.56e-23;19!CL:0002541;1.63e-08;3!CL:0002537;2.05e-08;5!CL:0002577;3.02e-08;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000349;7.56e-23;19!CL:0002541;1.63e-08;3!CL:0002537;2.05e-08;5!CL:0002577;3.02e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.27e-23,19;CL:0002541,1.61e-08,3;CL:0002537,2.51e-08,5;CL:0002577,3.07e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000478;3.27e-23;24!UBERON:0005631;1.87e-19;10!UBERON:0000158;1.87e-19;10!UBERON:0000305;9.31e-13;7!UBERON:0001987;1.55e-10;4!UBERON:0003124;1.63e-08;3!UBERON:0000920;1.63e-08;3!UBERON:0000922;4.54e-08;49 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.58e-14!14;UBERON:0000158!6.58e-14!14;UBERON:0007023!1.54e-10!115;UBERON:0000478!2.94e-10!24;UBERON:0003124!4.47e-09!7;UBERON:0004119!1.46e-08!169;UBERON:0000925!1.46e-08!169;UBERON:0006595!1.46e-08!169;UBERON:0000481!5.91e-08!347;UBERON:0001046!6.41e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;3.27e-23;24!UBERON:0005631;1.87e-19;10!UBERON:0000158;1.87e-19;10!UBERON:0000305;9.31e-13;7!UBERON:0001987;1.55e-10;4!UBERON:0003124;1.63e-08;3!UBERON:0000920;1.63e-08;3!UBERON:0000922;4.54e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.80e-28,14;UBERON:0000158,3.80e-28,14;UBERON:0000478,3.58e-23,24;UBERON:0003124,2.40e-17,7;UBERON:0000305,1.16e-12,7;UBERON:0004871,5.66e-11,8;UBERON:0001987,1.59e-10,4;UBERON:0004340,1.59e-10,4;UBERON:0000920,1.61e-08,3 | |||
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| ||
|short_description=p30@IGF2 | |short_description=p30@IGF2 | ||
}} | }} |
Latest revision as of 08:36, 17 September 2015
Short description: | p30@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 82bp_to_ENST00000381406, NM_000612, uc001lvg.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.27e-23 | 19 |
chorionic membrane mesenchymal stem cell | 1.61e-08 | 3 |
amnion mesenchymal stem cell | 2.51e-08 | 5 |
placental epithelial cell | 3.07e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.80e-28 | 14 |
membranous layer | 3.80e-28 | 14 |
extraembryonic structure | 3.58e-23 | 24 |
chorion | 2.40e-17 | 7 |
amnion | 1.16e-12 | 7 |
somatic layer of lateral plate mesoderm | 5.66e-11 | 8 |
placenta | 1.59e-10 | 4 |
allantois | 1.59e-10 | 4 |
egg chorion | 1.61e-08 | 3 |