FFCP PHASE1:Hg19::chr11:2160161..2160172,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:2160161..2160172,-
|short_description=p34@IGF2
|description=CAGE_peak_34_at_IGF2_5end
|association_with_transcript=31bp_to_ENST00000381406,NM_000612,uc001...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=31bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | |||
|cluster_id=chr11:2160161..2160172,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_34_at_IGF2_5end | |||
|id=chr11:2160161..2160172,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;6.76e-19;19!CL:0002537;2.35e-10;5!CL:0002541;2.24e-07;3!CL:0002577;8.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.96e-19,19;CL:0002537,4.13e-10,5;CL:0002541,2.58e-07,3;CL:0002577,7.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.65e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.23e-18!115;UBERON:0005631!6.19e-14!14;UBERON:0000158!6.19e-14!14;UBERON:0000064!1.47e-08!219;UBERON:0000478!1.78e-08!24;UBERON:0003124!6.77e-08!7;UBERON:0000305!1.18e-07!7;UBERON:0000481!1.64e-07!347;UBERON:0004923!3.45e-07!57;UBERON:0002616!7.08e-07!59;UBERON:0001046!8.33e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.66e-20;10!UBERON:0000158;6.66e-20;10!UBERON:0000478;4.14e-19;24!UBERON:0000305;3.32e-14;7!UBERON:0001987;9.84e-09;4!UBERON:0000922;1.69e-07;49!UBERON:0003124;2.24e-07;3!UBERON:0000920;2.24e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.77e-27,14;UBERON:0000158,9.77e-27,14;UBERON:0000478,5.95e-19,24;UBERON:0003124,1.92e-14,7;UBERON:0000305,5.90e-14,7;UBERON:0004871,4.76e-12,8;UBERON:0001987,8.50e-09,4;UBERON:0004340,8.50e-09,4;UBERON:0004923,6.15e-08,66;UBERON:0000920,2.58e-07,3 | |||
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| ||
|short_description=p34@IGF2 | |||
}} | }} |
Latest revision as of 08:37, 17 September 2015
Short description: | p34@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 31bp_to_ENST00000381406, NM_000612, uc001lvg.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.96e-19 | 19 |
amnion mesenchymal stem cell | 4.13e-10 | 5 |
chorionic membrane mesenchymal stem cell | 2.58e-07 | 3 |
placental epithelial cell | 7.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.77e-27 | 14 |
membranous layer | 9.77e-27 | 14 |
extraembryonic structure | 5.95e-19 | 24 |
chorion | 1.92e-14 | 7 |
amnion | 5.90e-14 | 7 |
somatic layer of lateral plate mesoderm | 4.76e-12 | 8 |
placenta | 8.50e-09 | 4 |
allantois | 8.50e-09 | 4 |
organ component layer | 6.15e-08 | 66 |
egg chorion | 2.58e-07 | 3 |