FFCP PHASE1:Hg19::chr11:2160180..2160257,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=0bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | |association_with_transcript=0bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | ||
|cluster_id=chr11:2160180..2160257,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_19_at_IGF2_5end | |description=CAGE_peak_19_at_IGF2_5end | ||
|id=chr11:2160180..2160257,- | |id=chr11:2160180..2160257,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.93e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.70e-11,19 | |||
|ontology_enrichment_development_v019=UBERON:0003104;6.23e-07;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.68e-17!115;UBERON:0000481!2.30e-14!347;UBERON:0000468!5.93e-13!659;UBERON:0004119!8.41e-13!169;UBERON:0000925!8.41e-13!169;UBERON:0006595!8.41e-13!169;UBERON:0005631!3.79e-11!14;UBERON:0000158!3.79e-11!14;UBERON:0000922!6.61e-11!612;UBERON:0002050!4.58e-10!605;UBERON:0005423!4.58e-10!605;UBERON:0000467!4.90e-10!625;UBERON:0000480!7.03e-10!626;UBERON:0000923!1.05e-09!604;UBERON:0005291!1.05e-09!604;UBERON:0006598!1.05e-09!604;UBERON:0002532!1.05e-09!604;UBERON:0000477!1.17e-09!286;UBERON:0000119!1.51e-09!312;UBERON:0000475!1.83e-09!365;UBERON:0002100!2.09e-09!216;UBERON:0000483!3.48e-09!309;UBERON:0000064!4.58e-09!219;UBERON:0001007!5.24e-09!155;UBERON:0001555!5.24e-09!155;UBERON:0007026!5.24e-09!155;UBERON:0000062!8.05e-09!511;UBERON:0003104!1.51e-08!238;UBERON:0009142!1.51e-08!238;UBERON:0005177!4.05e-08!107;UBERON:0004921!7.95e-08!129;UBERON:0004185!7.95e-08!129;UBERON:0004111!8.11e-08!241;UBERON:0000160!8.37e-08!27;UBERON:0000077!8.54e-08!130;UBERON:0001008!9.00e-08!45;UBERON:0000478!1.11e-07!24;UBERON:0005409!2.65e-07!35;UBERON:0006554!2.67e-07!44;UBERON:0005256!3.12e-07!143;UBERON:0000466!3.32e-07!126;UBERON:0003064!4.45e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.13e-10;24!UBERON:0005631;1.91e-10;10!UBERON:0000158;1.91e-10;10!UBERON:0000160;8.95e-10;17!UBERON:0005409;3.90e-09;22!UBERON:0000305;1.18e-07;7!UBERON:0004921;3.33e-07;33!UBERON:0000922;8.32e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.54e-15,160;UBERON:0000925,1.54e-15,160;UBERON:0006595,1.54e-15,160;UBERON:0005631,5.78e-14,14;UBERON:0000158,5.78e-14,14;UBERON:0000478,1.02e-10,24;UBERON:0001007,1.77e-10,145;UBERON:0001555,1.77e-10,145;UBERON:0007026,1.77e-10,145;UBERON:0000160,7.26e-10,17;UBERON:0007023,8.50e-10,114;UBERON:0001008,1.06e-09,48;UBERON:0004921,2.06e-09,118;UBERON:0005409,2.42e-09,25;UBERON:0006554,4.20e-09,47;UBERON:0003104,4.31e-08,160;UBERON:0009142,4.31e-08,160;UBERON:0003124,6.31e-08,7;UBERON:0000305,1.18e-07,7;UBERON:0011216,1.43e-07,223;UBERON:0001046,4.48e-07,19;UBERON:0003064,5.42e-07,28;UBERON:0005177,7.25e-07,101 | |||
|phase1_expression=2.54349730978779,0.642301571672949,0.845726424575827,4.00293193412522,3.12872766099101,3.48935409640147,0,0,0,2.21160542851358,2.79120467188971,14.8540133048517,24.2665619970177,2.72285976512103,5.30235801164665,0,0,0,0,0.61560529038394,5.71201935483908,2.19418305034661,0,0,0.376627918784408,0,0,0,0,0,0.77408061658038,0,0.6024118375565,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.579386075843295,0,0,0.472674085820339,0.443458794925128,0,1.17881167947941,0,0,0,0,0,0,0,0,0.993812036833525,0.860234595106124,0.347140501607594,1.13061588384802,1.25849830862972,1.37559020970034,0,0.516833518338658,0.35576626268671,1.67360306382335,0,0,0.24406205754817,0,6.48113558305408,0.17859945656816,0.44905874525234,0.225222960966644,1.53316637465883,0.949265659568129,2.38162267109529,0,0,0.436094052142534,0,0,0,0,0,1.12135520028461,0,0,0.933633106199299,0.404132016209064,0.163461903113459,8.1733010928263,16.70910180992,1.87457145467037,0,0,0,0,0.485618833104395,0.140450806702248,0.408308342509787,0.61417158655884,0.516628905878827,27.3240657174872,19.2868204837274,0.910161361938026,0.718618141816238,2.69337782326506,3.25308151667107,1.10825646193673,7.90159717585508,1.22595118319608,8.41333129876942,0.453728732640084,0,1.06778694409284,0,0,0,0,0,0,0,0,0.0920498986422993,1.13152239773168,0,0,0.169560592310488,0,0,0,0,0.132529768321485,1.16193942869518,1.24393266018445,0,0,0,0,0,9.75172648867156,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,3.7041661019826,7.3504355692771,0,0,5.31710916013264,0,22.3838958148467,0.171567810298526,0,0,0,1.11106134190236,3.25808305310325,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0.0895585227028483,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0.224262168690721,8.28324130783232,0.36669142910475,0,0,0,10.9034627799797,9.36066932202295,3.34369586540785,2.83698264046557,3.19706614819319,9.72250356875403,46.6654580636641,11.5253647149308,0,8.17401482107855,1.58390374586686,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,1.15825045334063,2.67119219315498,2.14873155887875,0,0,0,0,0,0,0,0,0,0,0,0,7.72956397830581,1.50051156317903,8.95174578209127,8.31883446123229,6.42344359669782,7.56971592162886,12.1827071592422,1.80567659836631,11.3703752027992,5.17365356462525,0.664225598535437,0.184369168541703,0.0868836144680828,58.5445460813594,91.2761507336877,0,0,0,11.8219752864041,23.3009615314696,29.9366390396384,0,1.99500565274481,0,0.128139149255701,3.07024349440022,1.28683136914886,2.96836132889982,0,0,0,2.07701771673448,0,37.8290077221778,2.6065841139427,1.19705285616665,1.7222167224691,1.45672934405374,4.72047893853927,1.80479845162965,2.0794141018192,2.35304930753057,0,0.211103257785751,1.13733384070897,0.170093705276516,4.31831832204279,12.3381802152231,8.67028600140329,10.0337954770971,0,0.831076008928724,0.895499018888713,0.438519753291869,1.3071772551245,0,0.328014645699706,0,9.37673205994273,0.183138929636687,0.165018999841176,0.574265537996172,0,0,0.96670718292122,0.308097234229289,0.15350367472613,0.827019434907183,0,0.725083469571143,0.93749290157711,10.1496520637281,3.30569830721956,4.22818148203234,0.638063562472921,4.046311234222,0,0.31481234683064,3.485186350803,0.308033580176089,0,0,0,0.143124886741991,1.86079184679834,3.79655309662471,8.57835872657212,2.81487570442467,13.2661086290515,0.318203247925937,0,8.09426059124916,2.74537029736055,1.88499843753098,0,0,0.421258456238981,5.85160486907508,0,0,11.8754922924948,0.565621727814851,0,0,0,0,0,0.655894752046633,0,0,0,0.717056761020258,5.01070109166918,0,0,0,0.658589785919804,3.03578539012572,2.44954304171488,1.15466535270614,1.34060455107157,0,9.22609247612436,25.3998169876026,5.05414427002877,12.4160442990269,19.2967656173846,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.4631098421569,0,0,0,0,12.0136707002953,0,0,5.96685908293468,40.825306890145,40.0902319124062,52.2173193568695,0,0.562677665642051,0,0,1.47787785689595,3.18796781201712,6.63081397274754,0.503865495708552,0,0,0,0,0,0,6.11589114948988,2.3948309234694,0,0,1.11321717794222,0,0,0,15.9499906595655,0,0.762760950878299,0,0.689486746482929,0,0,1.77148277162768,0,0,0.110579259931225,0.295547618953547,3.72955175161753,0,0,11.4655885170658,0,30.2038714748359,0,0,39.556143806758,13.8312366036812,219.077292943659,0,0,0,0,0,0,0,0,0,0,8.48118428603645,0,2.98578579323551,3.80367527364358,50.1044718845573,0,0,0,0.808813595768125,73.8371435514886,0.937057782901357,0,0.391329237864179,0,1.18375320854817,8.46935012340647,1.53036380815245,7.898322453561,0,0.103688191397247,13.2930774541437,1.98595173525299,6.27865836814451,10.7525186795663,0,0,0,0,0,21.3166535255277,0,0,0,0,3.39461557709468,0.8825612669150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| 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| ||
|short_description=p19@IGF2 | |short_description=p19@IGF2 | ||
}} | }} |
Latest revision as of 08:37, 17 September 2015
Short description: | p19@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 0bp_to_ENST00000381406, NM_000612, uc001lvg.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.70e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.54e-15 | 160 |
endoderm | 1.54e-15 | 160 |
presumptive endoderm | 1.54e-15 | 160 |
extraembryonic membrane | 5.78e-14 | 14 |
membranous layer | 5.78e-14 | 14 |
extraembryonic structure | 1.02e-10 | 24 |
digestive system | 1.77e-10 | 145 |
digestive tract | 1.77e-10 | 145 |
primitive gut | 1.77e-10 | 145 |
intestine | 7.26e-10 | 17 |
adult organism | 8.50e-10 | 114 |
renal system | 1.06e-09 | 48 |
subdivision of digestive tract | 2.06e-09 | 118 |
gastrointestinal system | 2.42e-09 | 25 |
urinary system structure | 4.20e-09 | 47 |
mesenchyme | 4.31e-08 | 160 |
entire embryonic mesenchyme | 4.31e-08 | 160 |
chorion | 6.31e-08 | 7 |
amnion | 1.18e-07 | 7 |
organ system subdivision | 1.43e-07 | 223 |
hindgut | 4.48e-07 | 19 |
intermediate mesoderm | 5.42e-07 | 28 |
trunk region element | 7.25e-07 | 101 |