FFCP PHASE1:Hg19::chr10:15761845..15761856,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8516 | |EntrezGene=8516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6144 | |HGNC=6144 | ||
|TSSclassifier=strong | |||
|UniProt=F5H818,P53708 | |UniProt=F5H818,P53708 | ||
|association_with_transcript=-75bp_to_ENST00000538044,NM_003638,uc001ioc.1,uc010qcb.1_5end | |association_with_transcript=-75bp_to_ENST00000538044,NM_003638,uc001ioc.1,uc010qcb.1_5end | ||
|cluster_id=chr10:15761845..15761856,- | |||
|coexpression_cluster_id=C230 | |coexpression_cluster_id=C230 | ||
|description=CAGE_peak_4_at_ITGA8_5end | |description=CAGE_peak_4_at_ITGA8_5end | ||
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|ontology_enrichment_celltype=CL:0000057!2.36e-13!75;CL:0002552!4.36e-07!5;CL:0002620!4.42e-07!23 | |ontology_enrichment_celltype=CL:0000057!2.36e-13!75;CL:0002552!4.36e-07!5;CL:0002620!4.42e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000346;3.52e-13;3!CL:1000428;3.52e-13;3!CL:0000708;1.13e-12;3!CL:0002559;4.44e-08;5!CL:0002556;3.85e-07;6 | |ontology_enrichment_celltype_v019=CL:0000346;3.52e-13;3!CL:1000428;3.52e-13;3!CL:0000708;1.13e-12;3!CL:0002559;4.44e-08;5!CL:0002556;3.85e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000346,3.39e-13,3;CL:1000428,3.39e-13,3;CL:0000708,9.05e-13,3;CL:0002559,4.35e-08,5;CL:0002556,3.90e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.14e-09;2!UBERON:0007297;8.94e-09;2 | |ontology_enrichment_development_v019=UBERON:0006965;2.14e-09;2!UBERON:0007297;8.94e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.50e-28!115;UBERON:0000475!1.77e-14!365;UBERON:0000153!7.85e-11!129;UBERON:0007811!7.85e-11!129;UBERON:0003102!2.47e-10!95;UBERON:0000033!5.06e-10!123;UBERON:0004121!2.75e-09!169;UBERON:0001049!2.79e-09!57;UBERON:0005068!2.79e-09!57;UBERON:0006241!2.79e-09!57;UBERON:0007135!2.79e-09!57;UBERON:0000062!5.74e-09!511;UBERON:0002616!6.56e-09!59;UBERON:0005743!7.34e-09!86;UBERON:0001017!7.48e-09!82;UBERON:0000924!9.26e-09!173;UBERON:0006601!9.26e-09!173;UBERON:0000955!1.19e-08!69;UBERON:0006238!1.19e-08!69;UBERON:0000073!1.99e-08!94;UBERON:0001016!1.99e-08!94;UBERON:0000468!1.68e-07!659;UBERON:0000477!2.65e-07!286;UBERON:0003075!4.23e-07!86;UBERON:0007284!4.23e-07!86;UBERON:0002780!5.10e-07!41;UBERON:0001890!5.10e-07!41;UBERON:0006240!5.10e-07!41;UBERON:0002097!5.79e-07!40;UBERON:0003080!9.62e-07!42 | |ontology_enrichment_uberon=UBERON:0007023!3.50e-28!115;UBERON:0000475!1.77e-14!365;UBERON:0000153!7.85e-11!129;UBERON:0007811!7.85e-11!129;UBERON:0003102!2.47e-10!95;UBERON:0000033!5.06e-10!123;UBERON:0004121!2.75e-09!169;UBERON:0001049!2.79e-09!57;UBERON:0005068!2.79e-09!57;UBERON:0006241!2.79e-09!57;UBERON:0007135!2.79e-09!57;UBERON:0000062!5.74e-09!511;UBERON:0002616!6.56e-09!59;UBERON:0005743!7.34e-09!86;UBERON:0001017!7.48e-09!82;UBERON:0000924!9.26e-09!173;UBERON:0006601!9.26e-09!173;UBERON:0000955!1.19e-08!69;UBERON:0006238!1.19e-08!69;UBERON:0000073!1.99e-08!94;UBERON:0001016!1.99e-08!94;UBERON:0000468!1.68e-07!659;UBERON:0000477!2.65e-07!286;UBERON:0003075!4.23e-07!86;UBERON:0007284!4.23e-07!86;UBERON:0002780!5.10e-07!41;UBERON:0001890!5.10e-07!41;UBERON:0006240!5.10e-07!41;UBERON:0002097!5.79e-07!40;UBERON:0003080!9.62e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;3.52e-13;3!UBERON:0001992;3.52e-13;3!UBERON:0003210;1.13e-12;3!UBERON:0002073;4.44e-08;5!UBERON:0001758;3.85e-07;6!UBERON:0003672;3.85e-07;6!UBERON:0004457;4.25e-07;9!UBERON:0000042;4.25e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0000412;3.52e-13;3!UBERON:0001992;3.52e-13;3!UBERON:0003210;1.13e-12;3!UBERON:0002073;4.44e-08;5!UBERON:0001758;3.85e-07;6!UBERON:0003672;3.85e-07;6!UBERON:0004457;4.25e-07;9!UBERON:0000042;4.25e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,3.39e-13,3;UBERON:0001992,3.39e-13,3;UBERON:0003210,9.05e-13,3;UBERON:0002073,4.35e-08,5;UBERON:0005086,4.35e-08,5;UBERON:0004457,5.62e-08,12;UBERON:0000042,5.62e-08,12;UBERON:0001758,3.90e-07,6;UBERON:0003672,3.90e-07,6 | |||
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| ||
|short_description=p4@ITGA8 | |short_description=p4@ITGA8 | ||
}} | }} |
Latest revision as of 08:44, 17 September 2015
Short description: | p4@ITGA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ITGA8_5end |
Coexpression cluster: | C230_aorta_normal_heart_penis_osteosarcoma_basal_lung |
Association with transcript: | -75bp_to_ENST00000538044, NM_003638, uc001ioc.1, uc010qcb.1_5end |
EntrezGene: | ITGA8 |
HGNC: | 6144 |
UniProt: | F5H818P53708 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 3.39e-13 | 3 |
stem cell of epidermis | 3.39e-13 | 3 |
leptomeningeal cell | 9.05e-13 | 3 |
hair follicle cell | 4.35e-08 | 5 |
fibroblast of periodontium | 3.90e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 3.39e-13 | 3 |
papillary layer of dermis | 3.39e-13 | 3 |
blood-cerebrospinal fluid barrier | 9.05e-13 | 3 |
hair follicle | 4.35e-08 | 5 |
hair follicle placode | 4.35e-08 | 5 |
cavity lining | 5.62e-08 | 12 |
serous membrane | 5.62e-08 | 12 |
periodontium | 3.90e-07 | 6 |
dentition | 3.90e-07 | 6 |