FFCP PHASE1:Hg19::chr11:2162543..2162562,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=C9JAF2 | |UniProt=C9JAF2 | ||
|association_with_transcript=-75bp_to_ENST00000434045_5end | |association_with_transcript=-75bp_to_ENST00000434045_5end | ||
|cluster_id=chr11:2162543..2162562,- | |||
|coexpression_cluster_id=C129 | |coexpression_cluster_id=C129 | ||
|description=CAGE_peak_61_at_IGF2_5end | |description=CAGE_peak_61_at_IGF2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000349!9.43e-12!3;CL:0002577!9.43e-12!3;CL:0002541!1.04e-10!3;CL:0002536!2.25e-08!2;CL:0002537!4.41e-07!5 | |ontology_enrichment_celltype=CL:0000349!9.43e-12!3;CL:0002577!9.43e-12!3;CL:0002541!1.04e-10!3;CL:0002536!2.25e-08!2;CL:0002537!4.41e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;7.87e-36;19!CL:0002577;3.72e-27;3!CL:0002536;1.43e-18;2!CL:0002537;3.73e-16;5!CL:0000182;3.04e-07;12 | |ontology_enrichment_celltype_v019=CL:0000349;7.87e-36;19!CL:0002577;3.72e-27;3!CL:0002536;1.43e-18;2!CL:0002537;3.73e-16;5!CL:0000182;3.04e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.73e-36,19;CL:0002577,5.07e-27,3;CL:0002536,1.43e-18,2;CL:0002537,3.36e-16,5;CL:0000182,2.85e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.72e-13;11!UBERON:0009497;2.83e-11;13!UBERON:0003124;8.99e-10;1!UBERON:0003104;4.57e-07;31 | |ontology_enrichment_development_v019=UBERON:0004161;2.72e-13;11!UBERON:0009497;2.83e-11;13!UBERON:0003124;8.99e-10;1!UBERON:0003104;4.57e-07;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.01e-34!14;UBERON:0000158!3.01e-34!14;UBERON:0003124!6.64e-24!7;UBERON:0000478!9.00e-19!24;UBERON:0001987!6.03e-15!4;UBERON:0004340!6.03e-15!4;UBERON:0000305!6.55e-13!7;UBERON:0004871!3.02e-11!8;UBERON:0000476!1.04e-10!3;UBERON:0000920!1.04e-10!3;UBERON:0004923!9.68e-09!57;UBERON:0001630!8.43e-08!2;UBERON:0005090!8.43e-08!2;UBERON:0003127!1.71e-07!2 | |ontology_enrichment_uberon=UBERON:0005631!3.01e-34!14;UBERON:0000158!3.01e-34!14;UBERON:0003124!6.64e-24!7;UBERON:0000478!9.00e-19!24;UBERON:0001987!6.03e-15!4;UBERON:0004340!6.03e-15!4;UBERON:0000305!6.55e-13!7;UBERON:0004871!3.02e-11!8;UBERON:0000476!1.04e-10!3;UBERON:0000920!1.04e-10!3;UBERON:0004923!9.68e-09!57;UBERON:0001630!8.43e-08!2;UBERON:0005090!8.43e-08!2;UBERON:0003127!1.71e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;3.85e-35;4!UBERON:0000478;1.35e-34;24!UBERON:0000305;6.80e-31;7!UBERON:0005631;9.47e-31;10!UBERON:0000158;9.47e-31;10!UBERON:0005795;8.99e-10;1!UBERON:0002107;9.34e-08;19!UBERON:0006925;9.34e-08;19 | |ontology_enrichment_uberon_v019=UBERON:0001987;3.85e-35;4!UBERON:0000478;1.35e-34;24!UBERON:0000305;6.80e-31;7!UBERON:0005631;9.47e-31;10!UBERON:0000158;9.47e-31;10!UBERON:0005795;8.99e-10;1!UBERON:0002107;9.34e-08;19!UBERON:0006925;9.34e-08;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.01e-60,14;UBERON:0000158,3.01e-60,14;UBERON:0001987,4.81e-35,4;UBERON:0004340,4.81e-35,4;UBERON:0000478,1.42e-34,24;UBERON:0000305,6.01e-31,7;UBERON:0003124,7.25e-31,7;UBERON:0004871,4.42e-27,8;UBERON:0004923,1.26e-11,66;UBERON:0005795,1.03e-09,22;UBERON:0002107,8.86e-08,19;UBERON:0006925,8.86e-08,19;UBERON:0008836,8.86e-08,19;UBERON:0000995,7.66e-07,21;UBERON:0008835,9.89e-07,22;UBERON:0003894,9.89e-07,22 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,3.05817920982241,3.4289707169699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03127571446259,4.99306318531491,3.0239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.290012154876366,0,0,0.275673144969061,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,5.04839957415486,1.22864280839693,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.638002319463839,0.183195186803725,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,4.83962864194656,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,1.54435498075768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53746777989381,0,0,3.93915911536118,4.86253564448882,4.85305515750131,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.83927341015997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.3526177866441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50794029276486,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.214429632529969,0,0,3.12944890144643,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0.647428837187895,0,3.4794432940146,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.257831551894309,0,0,0,0,0.730336388246517,0,0,0.157771562193185,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,1.1903221573187,0,0.248298857183432,0,0,0.404234377916439,0,2.73786640868225,0,0.0717222053926763,1.33064142618405,0,0,0,0,0,0,1.22068853494722,0,0,0 | |phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,3.05817920982241,3.4289707169699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03127571446259,4.99306318531491,3.0239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.290012154876366,0,0,0.275673144969061,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,5.04839957415486,1.22864280839693,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.638002319463839,0.183195186803725,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,4.83962864194656,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,1.54435498075768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53746777989381,0,0,3.93915911536118,4.86253564448882,4.85305515750131,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.83927341015997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.3526177866441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50794029276486,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.214429632529969,0,0,3.12944890144643,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0.647428837187895,0,3.4794432940146,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.257831551894309,0,0,0,0,0.730336388246517,0,0,0.157771562193185,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,1.1903221573187,0,0.248298857183432,0,0,0.404234377916439,0,2.73786640868225,0,0.0717222053926763,1.33064142618405,0,0,0,0,0,0,1.22068853494722,0,0,0 | ||
|short_description=p61@IGF2 | |short_description=p61@IGF2 | ||
}} | }} |
Latest revision as of 08:57, 17 September 2015
Short description: | p61@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_61_at_IGF2_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | -75bp_to_ENST00000434045_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | C9JAF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.73e-36 | 19 |
placental epithelial cell | 5.07e-27 | 3 |
amniotic epithelial cell | 1.43e-18 | 2 |
amnion mesenchymal stem cell | 3.36e-16 | 5 |
hepatocyte | 2.85e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.01e-60 | 14 |
membranous layer | 3.01e-60 | 14 |
placenta | 4.81e-35 | 4 |
allantois | 4.81e-35 | 4 |
extraembryonic structure | 1.42e-34 | 24 |
amnion | 6.01e-31 | 7 |
chorion | 7.25e-31 | 7 |
somatic layer of lateral plate mesoderm | 4.42e-27 | 8 |
organ component layer | 1.26e-11 | 66 |
embryonic uterus | 1.03e-09 | 22 |
liver | 8.86e-08 | 19 |
digestive gland | 8.86e-08 | 19 |
liver bud | 8.86e-08 | 19 |
uterus | 7.66e-07 | 21 |
hepatic diverticulum | 9.89e-07 | 22 |
liver primordium | 9.89e-07 | 22 |