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FFCP PHASE1:Hg19::chr16:66959429..66959444,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=6236
|EntrezGene=6236
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=10446
|HGNC=10446
|TSSclassifier=strong
|UniProt=P55042
|UniProt=P55042
|association_with_transcript=0bp_to_ENST00000420652,NM_001128850,NM_004165,uc002eqn.2,uc002eqo.2_5end
|association_with_transcript=0bp_to_ENST00000420652,NM_001128850,NM_004165,uc002eqn.2,uc002eqo.2_5end
|cluster_id=chr16:66959429..66959444,-
|coexpression_cluster_id=C289
|description=CAGE_peak_1_at_RRAD_5end
|description=CAGE_peak_1_at_RRAD_5end
|id=chr16:66959429..66959444,-
|id=chr16:66959429..66959444,-
|ontology_enrichment_celltype=CL:0002057!7.35e-10!42;CL:0000860!3.90e-08!45
|ontology_enrichment_celltype=CL:0002057!7.35e-10!42;CL:0000860!3.90e-08!45
|ontology_enrichment_celltype_v019=CL:0000860;8.69e-11;33!CL:0002057;8.69e-11;33!CL:1000497;9.27e-07;17!CL:0002518;9.27e-07;17
|ontology_enrichment_celltype_v019_2=CL:0000860,8.02e-10,42;CL:0002057,8.02e-10,42;CL:0000473,5.20e-07,48;CL:0000234,5.20e-07,48
|ontology_enrichment_development_v019=CL:0002057;1.89e-07;42
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000480!1.05e-13!626;UBERON:0000467!2.47e-13!625;UBERON:0000062!7.45e-13!511;UBERON:0000468!6.14e-12!659;UBERON:0002050!1.26e-11!605;UBERON:0005423!1.26e-11!605;UBERON:0000922!1.34e-11!612;UBERON:0003103!1.84e-11!69;UBERON:0000923!2.04e-11!604;UBERON:0005291!2.04e-11!604;UBERON:0006598!2.04e-11!604;UBERON:0002532!2.04e-11!604;UBERON:0007023!3.65e-09!115;UBERON:0000926!5.72e-09!448;UBERON:0004120!5.72e-09!448;UBERON:0006603!5.72e-09!448;UBERON:0000481!2.88e-08!347;UBERON:0005256!8.82e-08!143;UBERON:0004111!1.56e-07!241;UBERON:0003081!3.59e-07!216
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0000922,4.90e-12,592;UBERON:0005423,7.44e-12,581;UBERON:0003103,1.67e-11,68;UBERON:0007023,2.00e-09,114;UBERON:0002050,6.33e-09,564;UBERON:0000923,2.37e-08,560;UBERON:0010316,2.37e-08,560;UBERON:0005291,2.37e-08,560;UBERON:0006598,2.37e-08,560;UBERON:0010317,2.37e-08,560;UBERON:0002532,2.37e-08,560;UBERON:0000926,5.03e-07,315;UBERON:0004120,5.03e-07,315;UBERON:0006603,5.03e-07,315
|phase1_expression=0.181678379270557,0.428201047781966,0.845726424575827,1.0007329835313,1.78784437770915,0,2.53299878168311,0.631719873426831,0.522371256399677,6.38908234903923,15.3516256953934,0.436882744260345,3.9565046734268,0.37129905888014,1.98838425436749,10.7572023432284,11.4511960324556,9.49403117503585,13.1741855673437,0.738726348460727,1.22400414746552,3.13454721478088,2.86235987131057,1.36874425072884,1.88313959392204,3.51501666440576,3.61242593579761,2.67616656466509,11.4075640286182,11.1310525448192,24.46094748394,52.4070097952988,19.277178801808,6.65557218300218,0,0,0.587200878669695,33.7937199204445,14.6397446653203,29.5134784173558,0,0,0,2.61716829803216,5.66813915533214,11.6440349370152,7.67015821788759,34.9492704818552,57.2956786155942,34.5230870786581,20.4928565223281,38.5466034718394,122.039970980763,109.73239620925,203.139729891513,6.40023954444856,15.0098382531815,32.5849052445373,85.7034898638527,101.092643528969,202.669868878296,2.30895910130701,2.39356389145958,7.2458207590558,30.1817608173727,55.6037520197317,75.9843143774602,13.3161792586074,27.1171117578505,37.5736701339852,38.1401686659022,88.3866326370155,95.5716410071471,0.211255286311942,2.97646019951061,1.88692780957538,0.22465726229299,1.80212271409808,0.48217676009124,0.570025487482497,0.39783335439818,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,1.52909291250092,1.32171328579026,11.7706798226123,0,0.196709770113833,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80642697289893,0.267440195783507,0.289648807765598,0,0.670700859703636,0.383587685530591,0.361439152384566,1.50401373190767,2.60723734129483,3.1811437882044,4.37971383272372,1.13441780596881,2.4390233720882,1.40535657109002,10.6747946530636,14.2075162434091,80.8310085270056,0,0,0.132957960518865,1.66943437013739,0,0,0.198762407366705,0,0.347140501607594,0,0.838998872419812,0.550236083880135,0.417989933073621,0,0.35576626268671,0,2.81980521976403,0.760272105718513,0.488124115096339,0,1.62028389576352,0,0,0.563057402416611,0,0,0.549605231791222,3.9534125230819,3.87780264148325,93.3241271585023,10.4364109856017,3.29239330327907,8.73900593367244,2.58152958673932,2.4826786753885,5.04609840128076,12.8098794875646,78.686947945074,0.622422070799533,0.67355336034844,0,0.151357427644931,0,0.234321431833797,2.18512053781224,0.570471821544449,0.896692083310806,1.87895197830024,0.647491777472526,0.280901613404497,0.816616685019573,0.122834317311768,3.71972812232756,9.50402285825643,9.39614331258516,0.910161361938026,13.6537446945085,0.673344455816265,0.250237039743928,1.10825646193673,4.82875382968922,3.0648779579902,12.7702350070607,1.13432183160021,0.717558542755448,2.77624605464138,0.211931901159562,1.20036438433761,0.412210116953756,2.57640540045629,1.11670113798954,3.03797398034279,0.0974370051611986,1.26216887122057,0.828449087780694,0.969876340912871,1.77504796258307,0.302256294682921,0.169560592310488,11.2091294834712,5.45492241181669,1.72082757233402,0.365921118388786,0,0.348581828608555,1.45125477021519,0.756962552626885,0.36497735907583,244.061270434513,50.8160341172379,31.7710319110705,30.1839153220786,31.0408177117922,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,2.80483547606892,3.2925920906512,8.82052268313252,0,1.96565443335525,0,0,0.368965315629341,0.171567810298526,8.88977311809867,25.8524032492525,4.62433273093502,4.53683381276795,0.325808305310325,0,5.77325368101093,3.70977295920246,2.93521735589554,2.02113026865503,6.01881166349594,0.951270761172991,0,0,0,0.234004265139238,0.445893486866185,4.68669169933885,9.07103492273841,4.39502801451398,0.268675568108545,1.16253575405585,0.766765358330422,41.8763752211552,7.21997158908454,700.76903052781,354.535085405725,514.185431345645,0,0,0,3.4214489204541,0,0,0,0,0,0.07333828582095,1.93907573636667,3.57656445851882,0.845302752556,3.98907174877306,8.32059495290929,1.80045161983499,5.67396528093113,0.266422179016099,4.57529579706072,2.17048642156577,2.46972101034231,0.65147236858747,6.75244702610837,4.75171123760058,6.33022691825131,4.35766729300147,8.19778527692868,1.2162378064119,0,0,0.718874566474748,0,0,2.89562613335158,0.205476322550383,21.8454375152673,0.112085143993527,3.34952292343276,1.94064817373566,4.2353201972317,0.254094624222463,0,3.86644406388848,0,5.10351001322531,0,0,0,0.12269149171914,1.50051156317903,0.813795071099207,2.49565033836969,2.3195768543631,1.89242898040722,5.15422225967938,0.902838299183157,2.27407504055985,6.2083842775503,0,3.50301420229236,6.34250385617005,1.76221041716467,1.37257369524342,2.68798433959754,6.25571182373989,5.87001567918944,21.5220575726844,0,0.907170879989041,0.248107807818777,0.153461973288062,0.561320188866147,0.768834895534206,1.53512174720011,0.482561763430822,1.48418066444991,0.462629081407967,0.887808626565635,0.492762936082855,3.63478100428535,0.697262270759755,0.725156697549733,2.40607764363942,7.18231713699991,2.985175652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|short_description=p1@RRAD
|short_description=p1@RRAD
}}
}}

Latest revision as of 09:05, 17 September 2015

Short description:p1@RRAD
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_RRAD_5end
Coexpression cluster:C289_chorionic_skeletal_heart_Mast_amniotic_granulosa_left
Association with transcript: 0bp_to_ENST00000420652, NM_001128850, NM_004165, uc002eqn.2, uc002eqo.2_5end
EntrezGene:RRAD
HGNC: 10446
UniProt: P55042
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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