FFCP PHASE1:Hg19::chr20:5986756..5986777,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54675 | |EntrezGene=54675 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16148 | |HGNC=16148 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJA2 | |UniProt=Q9UJA2 | ||
|association_with_transcript=17bp_to_NM_019095,uc002wmn.3,uc010gbq.2_5end | |association_with_transcript=17bp_to_NM_019095,uc002wmn.3,uc010gbq.2_5end | ||
|cluster_id=chr20:5986756..5986777,+ | |||
|description=CAGE_peak_1_at_CRLS1_5end | |description=CAGE_peak_1_at_CRLS1_5end | ||
|id=chr20:5986756..5986777,+ | |id=chr20:5986756..5986777,+ | ||
|ontology_enrichment_celltype=CL:0000223!8.28e-12!59;CL:0000066!2.15e-10!254;CL:0002076!3.74e-08!43 | |ontology_enrichment_celltype=CL:0000223!8.28e-12!59;CL:0000066!2.15e-10!254;CL:0002076!3.74e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.89e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.10e-11,58;CL:0000066,1.14e-10,253;CL:0002076,4.95e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0003104;4.08e-10;31!CL:0000223;6.65e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!8.63e-12!238;UBERON:0009142!8.63e-12!238;UBERON:0000466!1.43e-11!126;UBERON:0009569!1.96e-10!113;UBERON:0005177!2.76e-10!107;UBERON:0002417!6.66e-10!61;UBERON:0000916!6.66e-10!61;UBERON:0004119!1.07e-09!169;UBERON:0000925!1.07e-09!169;UBERON:0006595!1.07e-09!169;UBERON:0004921!2.17e-09!129;UBERON:0004185!2.17e-09!129;UBERON:0005172!6.01e-09!55;UBERON:0005173!6.01e-09!55;UBERON:0001007!1.08e-08!155;UBERON:0001555!1.08e-08!155;UBERON:0007026!1.08e-08!155;UBERON:0002365!1.74e-08!31;UBERON:0002330!1.74e-08!31;UBERON:0002100!1.77e-08!216;UBERON:0001041!4.78e-08!98;UBERON:0009856!7.33e-08!26;UBERON:0007499!9.35e-08!25;UBERON:0005911!2.68e-07!82;UBERON:0000077!3.00e-07!130;UBERON:0009854!4.58e-07!23;UBERON:0000464!5.58e-07!104;UBERON:0008835!5.84e-07!22;UBERON:0003894!5.84e-07!22;UBERON:0003103!6.97e-07!69;UBERON:0003929!8.03e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;2.92e-08;31!UBERON:0002330;2.92e-08;31!UBERON:0005172;2.36e-07;52!UBERON:0005173;2.36e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,4.48e-11,101;UBERON:0002417,1.76e-10,60;UBERON:0000916,1.76e-10,60;UBERON:0009569,2.64e-10,112;UBERON:0005172,1.60e-09,54;UBERON:0005173,1.60e-09,54;UBERON:0002100,2.47e-09,199;UBERON:0004119,1.03e-08,160;UBERON:0000925,1.03e-08,160;UBERON:0006595,1.03e-08,160;UBERON:0004921,1.12e-08,118;UBERON:0002365,1.74e-08,31;UBERON:0002330,1.74e-08,31;UBERON:0003104,3.51e-08,160;UBERON:0009142,3.51e-08,160;UBERON:0001007,4.87e-08,145;UBERON:0001555,4.87e-08,145;UBERON:0007026,4.87e-08,145;UBERON:0009856,7.33e-08,26;UBERON:0007499,9.35e-08,25;UBERON:0001041,2.21e-07,87;UBERON:0003103,2.68e-07,68;UBERON:0005911,2.68e-07,82;UBERON:0009854,4.58e-07,23;UBERON:0008835,5.84e-07,22;UBERON:0003894,5.84e-07,22;UBERON:0003929,8.03e-07,54 | |||
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54793842586 | ||
|short_description=p1@CRLS1 | |short_description=p1@CRLS1 | ||
}} | }} |
Latest revision as of 09:19, 17 September 2015
Short description: | p1@CRLS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CRLS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_NM_019095, uc002wmn.3, uc010gbq.2_5end |
EntrezGene: | CRLS1 |
HGNC: | 16148 |
UniProt: | Q9UJA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.10e-11 | 58 |
epithelial cell | 1.14e-10 | 253 |
endo-epithelial cell | 4.95e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 4.48e-11 | 101 |
abdominal segment of trunk | 1.76e-10 | 60 |
abdomen | 1.76e-10 | 60 |
subdivision of trunk | 2.64e-10 | 112 |
abdomen element | 1.60e-09 | 54 |
abdominal segment element | 1.60e-09 | 54 |
trunk | 2.47e-09 | 199 |
endoderm-derived structure | 1.03e-08 | 160 |
endoderm | 1.03e-08 | 160 |
presumptive endoderm | 1.03e-08 | 160 |
subdivision of digestive tract | 1.12e-08 | 118 |
exocrine gland | 1.74e-08 | 31 |
exocrine system | 1.74e-08 | 31 |
mesenchyme | 3.51e-08 | 160 |
entire embryonic mesenchyme | 3.51e-08 | 160 |
digestive system | 4.87e-08 | 145 |
digestive tract | 4.87e-08 | 145 |
primitive gut | 4.87e-08 | 145 |
sac | 7.33e-08 | 26 |
epithelial sac | 9.35e-08 | 25 |
foregut | 2.21e-07 | 87 |
compound organ | 2.68e-07 | 68 |
endo-epithelium | 2.68e-07 | 82 |
digestive tract diverticulum | 4.58e-07 | 23 |
hepatic diverticulum | 5.84e-07 | 22 |
liver primordium | 5.84e-07 | 22 |
gut epithelium | 8.03e-07 | 54 |