FFCP PHASE1:Hg19::chr1:28503756..28503768,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5724 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9582 | |||
|TSSclassifier=strong | |||
|UniProt=P25105 | |||
|association_with_transcript=-57bp_to_ENST00000373857_5end | |||
|cluster_id=chr1:28503756..28503768,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_5_at_PTAFR_5end | |||
|id=chr1:28503756..28503768,- | |||
|ontology_enrichment_celltype=CL:0000766!8.18e-26!76;CL:0000738!1.20e-25!140;CL:0000037!1.17e-23!172;CL:0000566!1.17e-23!172;CL:0002032!1.42e-23!165;CL:0000837!1.42e-23!165;CL:0002031!9.41e-23!124;CL:0000988!7.46e-22!182;CL:0000839!1.37e-21!70;CL:0000557!3.29e-21!71;CL:0000763!3.23e-20!112;CL:0000049!3.23e-20!112;CL:0002274!1.15e-19!5;CL:0000457!1.15e-19!5;CL:0002191!1.15e-19!5;CL:0000097!1.15e-19!5;CL:0000831!1.15e-19!5;CL:0002028!1.15e-19!5;CL:0002087!4.11e-17!119;CL:0002194!6.93e-14!63;CL:0000576!6.93e-14!63;CL:0000040!6.93e-14!63;CL:0000559!6.93e-14!63;CL:0002009!2.46e-13!65;CL:0000945!1.27e-11!24;CL:0000826!1.27e-11!24;CL:0002057!1.37e-11!42;CL:0000163!9.14e-11!9;CL:0000860!1.25e-10!45;CL:0000785!1.87e-08!2;CL:0000955!1.87e-08!2;CL:0000818!1.87e-08!2;CL:0000954!1.87e-08!2;CL:0000816!1.87e-08!2;CL:0000134!2.53e-07!358;CL:0002320!5.16e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.20e-61;5!CL:0000163;4.15e-34;9!CL:0000945;3.94e-25;24!CL:0000775;2.49e-17;3!CL:0000946;9.13e-14;1!CL:0000786;9.13e-14;1!CL:0000151;9.09e-11;36!CL:0000094;4.55e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.87e-61,5;CL:0002028,3.87e-61,5;CL:0000163,4.60e-34,9;CL:0000945,3.87e-25,24;CL:0000826,3.87e-25,24;CL:0000775,1.94e-17,3;CL:0000738,3.77e-16,136;CL:0002032,1.36e-15,161;CL:0000837,1.36e-15,161;CL:0000037,7.13e-15,168;CL:0000988,4.95e-14,177;CL:0000946,8.58e-14,1;CL:0000786,8.58e-14,1;CL:0000980,8.58e-14,1;CL:0002031,2.31e-13,120;CL:0000151,4.99e-12,36;CL:0000838,2.59e-11,52;CL:0000542,4.34e-11,53;CL:0000051,4.34e-11,53;CL:0000766,1.07e-07,72;CL:0000785,1.54e-07,2;CL:0000955,1.54e-07,2;CL:0000818,1.54e-07,2;CL:0000954,1.54e-07,2;CL:0000816,1.54e-07,2;CL:0000094,4.15e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000954;1.59e-07;2 | |||
|ontology_enrichment_disease=DOID:74!2.61e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:2355;4.53e-14;1!DOID:74;1.12e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,4.53e-14,1;DOID:74,1.12e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.38e-19!102;UBERON:0003061!3.38e-19!102;UBERON:0001474!2.81e-18!86;UBERON:0002371!3.31e-18!80;UBERON:0002193!6.67e-17!112;UBERON:0004765!1.03e-14!101;UBERON:0001434!1.03e-14!101;UBERON:0002405!5.13e-11!115;UBERON:0002204!9.65e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.9845235121417,41.2965964933227,56.9078948897901,0,0,0.154816123316076,0,0,0,0,2.41687695228617,0,0,0.200544447470142,0.434021741431704,0,0.647787332037959,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.468008530278475,0.891786973732369,0,0,0,0,0,0,1.47798971368783,4.4024217006613,2.48793738648926,1.8735593944205,2.01987893482208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,0,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,1.13929437434833,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17528995269619,0.605399121573143,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8309505256046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28190655765746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53514772622714,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p5@PTAFR | |||
}} |
Latest revision as of 09:59, 17 September 2015
Short description: | p5@PTAFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PTAFR_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -57bp_to_ENST00000373857_5end |
EntrezGene: | PTAFR |
HGNC: | 9582 |
UniProt: | P25105 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.87e-61 | 5 |
basophil mast progenitor cell | 3.87e-61 | 5 |
endocrine cell | 4.60e-34 | 9 |
lymphocyte of B lineage | 3.87e-25 | 24 |
pro-B cell | 3.87e-25 | 24 |
neutrophil | 1.94e-17 | 3 |
leukocyte | 3.77e-16 | 136 |
hematopoietic oligopotent progenitor cell | 1.36e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.36e-15 | 161 |
hematopoietic stem cell | 7.13e-15 | 168 |
hematopoietic cell | 4.95e-14 | 177 |
antibody secreting cell | 8.58e-14 | 1 |
plasma cell | 8.58e-14 | 1 |
plasmablast | 8.58e-14 | 1 |
hematopoietic lineage restricted progenitor cell | 2.31e-13 | 120 |
secretory cell | 4.99e-12 | 36 |
lymphoid lineage restricted progenitor cell | 2.59e-11 | 52 |
lymphocyte | 4.34e-11 | 53 |
common lymphoid progenitor | 4.34e-11 | 53 |
myeloid leukocyte | 1.07e-07 | 72 |
mature B cell | 1.54e-07 | 2 |
pre-B-II cell | 1.54e-07 | 2 |
transitional stage B cell | 1.54e-07 | 2 |
small pre-B-II cell | 1.54e-07 | 2 |
immature B cell | 1.54e-07 | 2 |
granulocyte | 4.15e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
anemia | 4.53e-14 | 1 |
hematopoietic system disease | 1.12e-07 | 2 |