FFCP PHASE1:Hg19::chr9:37034186..37034216,-: Difference between revisions
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|id=chr9:37034186..37034216,-
|short_description=p2@PAX5
|description=CAGE_peak_2_at_PAX5_5end
|association_with_transcript=-83bp_to_ENST00000358127_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5079 | |EntrezGene=5079 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8619 | |HGNC=8619 | ||
|TSSclassifier=strong | |||
|UniProt=Q02548 | |UniProt=Q02548 | ||
|association_with_transcript=-83bp_to_ENST00000358127_5end | |||
|cluster_id=chr9:37034186..37034216,- | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_2_at_PAX5_5end | |||
|id=chr9:37034186..37034216,- | |||
|ontology_enrichment_celltype=CL:0000945!1.59e-46!24;CL:0000826!1.59e-46!24;CL:0000236!2.15e-31!14;CL:0000542!6.73e-19!53;CL:0000051!6.73e-19!53;CL:0000838!1.51e-17!52;CL:0002087!6.72e-16!119;CL:0000738!1.02e-13!140;CL:0002031!7.50e-11!124;CL:0000037!6.10e-10!172;CL:0000566!6.10e-10!172;CL:0000988!7.65e-09!182;CL:0002032!1.52e-08!165;CL:0000837!1.52e-08!165;CL:0000817!1.17e-07!3;CL:0000842!1.82e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.85e-77;24!CL:0000236;1.36e-52;13!CL:0000542;3.88e-23;53!CL:0000226;2.62e-12;3!CL:0000842;2.62e-12;3!CL:0002087;1.29e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.02e-77,24;CL:0000826,3.02e-77,24;CL:0000236,6.04e-56,14;CL:0000542,3.73e-35,53;CL:0000051,3.73e-35,53;CL:0000838,1.27e-32,52;CL:0002087,8.32e-19,115;CL:0000738,6.36e-15,136;CL:0000817,1.23e-12,3;CL:0000226,2.72e-12,3;CL:0000842,2.72e-12,3;CL:0002031,4.08e-12,120;CL:0000037,6.86e-11,168;CL:0000988,5.04e-10,177;CL:0002032,1.24e-08,161;CL:0000837,1.24e-08,161;CL:0000785,1.36e-08,2;CL:0000955,1.36e-08,2;CL:0000818,1.36e-08,2;CL:0000954,1.36e-08,2;CL:0000816,1.36e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;3.88e-23;53!UBERON:0004872;1.64e-09;7!CL:0000954;1.10e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.39e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.05e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.05e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.13e-19!15;UBERON:0000179!2.13e-19!15;UBERON:0000463!2.13e-19!15;UBERON:0007023!2.51e-13!115;UBERON:0002193!8.33e-09!112;UBERON:0002390!1.74e-08!102;UBERON:0003061!1.74e-08!102;UBERON:0004177!7.14e-08!7;UBERON:0002106!1.07e-07!3;UBERON:0004854!1.07e-07!3;UBERON:0009034!1.07e-07!3;UBERON:0002095!1.07e-07!3;UBERON:0004782!1.07e-07!3;UBERON:0003281!1.07e-07!3;UBERON:0009664!1.07e-07!3;UBERON:0002296!1.07e-07!3;UBERON:0005602!1.07e-07!3;UBERON:0001179!1.07e-07!3;UBERON:0006293!1.07e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.08e-35;15!UBERON:0000179;6.08e-35;15!UBERON:0000463;6.08e-35;15!UBERON:0002390;6.89e-26;32!UBERON:0002193;5.79e-18;42!UBERON:0004177;8.21e-13;5!UBERON:0005057;8.21e-13;5!UBERON:0002106;1.03e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.63e-35,15;UBERON:0000179,5.63e-35,15;UBERON:0000463,5.63e-35,15;UBERON:0002106,1.05e-12,3;UBERON:0004854,1.05e-12,3;UBERON:0009034,1.05e-12,3;UBERON:0002095,1.05e-12,3;UBERON:0004782,1.05e-12,3;UBERON:0003281,1.05e-12,3;UBERON:0009664,1.05e-12,3;UBERON:0002296,1.05e-12,3;UBERON:0005602,1.05e-12,3;UBERON:0001179,1.05e-12,3;UBERON:0006293,1.05e-12,3;UBERON:0004177,3.76e-09,7;UBERON:0005057,3.76e-09,7;UBERON:0002193,1.69e-08,108;UBERON:0002390,2.05e-07,98;UBERON:0003061,2.05e-07,98 | |||
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| ||
|short_description=p2@PAX5 | |||
}} | }} |
Latest revision as of 10:19, 17 September 2015
Short description: | p2@PAX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PAX5_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | -83bp_to_ENST00000358127_5end |
EntrezGene: | PAX5 |
HGNC: | 8619 |
UniProt: | Q02548 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.02e-77 | 24 |
pro-B cell | 3.02e-77 | 24 |
B cell | 6.04e-56 | 14 |
lymphocyte | 3.73e-35 | 53 |
common lymphoid progenitor | 3.73e-35 | 53 |
lymphoid lineage restricted progenitor cell | 1.27e-32 | 52 |
nongranular leukocyte | 8.32e-19 | 115 |
leukocyte | 6.36e-15 | 136 |
precursor B cell | 1.23e-12 | 3 |
single nucleate cell | 2.72e-12 | 3 |
mononuclear cell | 2.72e-12 | 3 |
hematopoietic lineage restricted progenitor cell | 4.08e-12 | 120 |
hematopoietic stem cell | 6.86e-11 | 168 |
hematopoietic cell | 5.04e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.24e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-08 | 161 |
mature B cell | 1.36e-08 | 2 |
pre-B-II cell | 1.36e-08 | 2 |
transitional stage B cell | 1.36e-08 | 2 |
small pre-B-II cell | 1.36e-08 | 2 |
immature B cell | 1.36e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 5.63e-35 | 15 |
haemolymphatic fluid | 5.63e-35 | 15 |
organism substance | 5.63e-35 | 15 |
spleen | 1.05e-12 | 3 |
gastrointestinal system mesentery | 1.05e-12 | 3 |
stomach region | 1.05e-12 | 3 |
mesentery | 1.05e-12 | 3 |
gastrointestinal system serosa | 1.05e-12 | 3 |
mesentery of stomach | 1.05e-12 | 3 |
gut mesentery | 1.05e-12 | 3 |
dorsal mesentery | 1.05e-12 | 3 |
dorsal mesogastrium | 1.05e-12 | 3 |
peritoneal cavity | 1.05e-12 | 3 |
spleen primordium | 1.05e-12 | 3 |
hemopoietic organ | 3.76e-09 | 7 |
immune organ | 3.76e-09 | 7 |
hemolymphoid system | 1.69e-08 | 108 |
hematopoietic system | 2.05e-07 | 98 |
blood island | 2.05e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.05e-09 | 10 |