FFCP PHASE1:Hg19::chr2:46488..46511,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:46488..46511,- to FFCP PHASE1:Hg19::chr2:46488..46511,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=642273 | |EntrezGene=642273 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33340 | |HGNC=33340 | ||
|TSSclassifier=strong | |||
|UniProt=Q1W6H9 | |UniProt=Q1W6H9 | ||
|association_with_transcript=76bp_to_NM_001077710_5end | |||
|cluster_id=chr2:46488..46511,- | |||
|coexpression_cluster_id=C4231 | |||
|description=CAGE_peak_2_at_FAM110C_5end | |||
|id=chr2:46488..46511,- | |||
|ontology_enrichment_celltype=CL:0002076!1.42e-17!43;CL:0000066!1.83e-17!254;CL:0000223!3.78e-14!59;CL:0002251!9.57e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.21e-13;42!CL:0000622;1.64e-08;5!CL:0002368;1.96e-08;13!CL:0000150;2.48e-08;9!CL:0002327;8.63e-08;4!CL:0002251;1.96e-07;20!CL:0000154;5.49e-07;6!CL:0000244;7.47e-07;4!CL:0000731;7.47e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.96e-17,42;CL:0000066,6.38e-14,253;CL:0000223,1.95e-13,58;CL:0000622,1.34e-08,5;CL:0002368,1.42e-08,13;CL:0000150,2.18e-08,9;CL:0002327,1.04e-07,4;CL:0002251,1.88e-07,20;CL:0000154,4.66e-07,6;CL:0000244,5.97e-07,4;CL:0000731,5.97e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.45e-09!106;DOID:299!2.23e-09!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:5093,9.66e-07,4;DOID:1612,9.66e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.59e-17!115;UBERON:0004119!4.08e-17!169;UBERON:0000925!4.08e-17!169;UBERON:0006595!4.08e-17!169;UBERON:0001007!1.71e-14!155;UBERON:0001555!1.71e-14!155;UBERON:0007026!1.71e-14!155;UBERON:0004921!6.70e-13!129;UBERON:0004185!6.70e-13!129;UBERON:0001041!9.88e-10!98;UBERON:0000077!1.61e-09!130;UBERON:0001004!4.49e-09!72;UBERON:0000062!9.36e-09!511;UBERON:0000481!1.75e-08!347;UBERON:0000064!3.77e-08!219;UBERON:0005177!1.75e-07!107;UBERON:0000466!3.03e-07!126;UBERON:0004121!5.53e-07!169;UBERON:0000924!7.25e-07!173;UBERON:0006601!7.25e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;8.63e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.53e-11,160;UBERON:0000925,1.53e-11,160;UBERON:0006595,1.53e-11,160;UBERON:0001007,3.24e-08,145;UBERON:0001555,3.24e-08,145;UBERON:0007026,3.24e-08,145;UBERON:0001911,1.04e-07,4;UBERON:0005333,1.04e-07,4;UBERON:0008425,1.04e-07,4;UBERON:0005311,1.04e-07,4;UBERON:0004921,1.83e-07,118;UBERON:0001004,2.70e-07,74;UBERON:0000166,5.90e-07,22;UBERON:0000161,8.50e-07,36 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0.872338524100369,0,0,0,0.491467873003018,0.697801167972428,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.154816123316076,4.59710612239464,1.8072355126695,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0.668462741311041,0.589211814949674,0.221533894583621,0.270803863765016,1.0247305578054,1.04047478047903,0,0,0,0,0,0,0,0.383220493601921,0.34362744548263,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,1.79007586580942,0,0,0,0,0,0,0,0.087834785693126,1.37528029272598,1.45718115317017,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09217365061275,0.818238361772504,4.58887352622406,0.609868530647977,0.265059536642971,0.464775771478074,0.310983165046111,0.504641701751257,0.36497735907583,0,0,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.55146986366197,0,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0.4115740113314,0,0,0,2.95394953340702,0,1.10689594688802,0.343135620597051,6.47526683910891,0,9.95236826875145,1.574003567695,0,0,0,0.115930404975077,0,0,0,0,4.74122638775565,1.71697232418975,0,0,0,0,0.503946384596579,0.850650583454319,9.76187897461046,13.6597951101562,5.36735750831296,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,4.52159065589379,0.871533458600294,9.19751518874925,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0.508189248444927,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,9.02279116364782,2.11786274552562,0,0,0,0.451199612907412,2.77255213575893,0.784349769176855,0,0.844413031143006,0,0,0,0,0,0.501689773854853,1.27438136522519,1.66215201785745,0.447749509444357,0,0,0.256450125116389,1.64007322849853,2.60302715731442,2.67906630284078,0,0,2.29706215198469,1.95018073810956,0,0,0,0,0,0,0,0,0,1.98341898433174,3.65161127993702,3.44554323735377,3.94515345336645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59799704358883,0.670302275535787,2.17781969722645,1.69458841398202,1.72202149068492,6.73885902670502,3.99087138183008,2.29723400206959,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0,0,0,2.45040215981032,0,0,0.213425530045242,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0.146508179271894,0,0,0,1.67121139316383,1.48482340416319,2.15012491469462,0,0,0,0,0,2.39097585901284,1.93398740871803,0,0,0,0,0.718946809178615,2.50629644545853,0,3.05794557474494,0,0,0,1.02044907978036,0,2.86470537193757,2.27395999990109,0,2.50345586228099,0,2.12748913591143,0,2.33283690706603,0,1.77148277162768,0.723578631752448,0,0,0.591095237907095,0.87754158861589,0.32681539055697,3.20674611840788,2.23155749661011,0,0,0,0.108647371922008,2.23300811812344,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0.816164040795739,0.424059214301822,0,2.98578579323551,2.83064206410685,0.611030144933625,0,0,0,0.741412462787447,0,0.234264445725339,0,1.9566461893209,0,17.3617137253732,2.41981432097328,0,0.31593289814244,0.150323419414493,0,0.664653872707185,0,0.313932918407225,2.38944859545918,2.27687636823834,0.138674673013139,0.347119476670262,3.82170349916073,0.957651272384428,11.0077800992479,0,0.19351266257817,0.219267951258557,0,14.3543744402861,0,1.12990370390266,0,0,0.379864775735272,0.782205530939212,0.240476460754601,3.20179492109029,0.19980960958213,0.72045208577053,0.458146384663663,0,0.14405479798815,0,2.59263438078475,0,0,0,0,0,0.273810757783986,0,3.86788897277961,0,0.279282401272254,0.458320848023367,0,0,0.429226048136571,0.669514372325618,0.335917362433631,0,0,0.236349546921671,0.0824158583811665,0.13480708770837,1.27955725969173,0,0,0,0.482259445395058,0.275078873194468,1.24632101408756,0.2249738915515,0,0.485996453264197,7.71499781478312,5.67401092554227,3.30463905250488,0,0,0.383830394638891,2.85878130549347,0,0,0,0,0,0,0,0,0,3.07759690723973,2.65013777824443,0.517131825446202,0.52893040697076,0.171086837884329,1.40963004463334,1.49502377594773,1.25763444079733,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0.327872630709804,0.628216385000937,0,0,0.3755727921195,1.14681839138014,0.332787154610557,0.745156835296601,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,2.55437935295271,1.14241563650639,0,0,0,0,0.398095888698616,0,0,0,0,0,13.7242618479952,0.260994291965212,0,0,0,0,0.617602894321944,4.82424909073156,0,1.15748422962549,0.506827321959218,1.53744911152768,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0.633936370075881,0,0,0,0,0,3.49698769298611,2.48830904013189,0,0,0.15726594185589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| 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| ||
|short_description=p2@FAM110C | |||
}} | }} |
Latest revision as of 10:26, 17 September 2015
Short description: | p2@FAM110C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM110C_5end |
Coexpression cluster: | C4231_ductus_esophagus_mesothelioma_peripheral_Mammary_epididymis_serous |
Association with transcript: | 76bp_to_NM_001077710_5end |
EntrezGene: | FAM110C |
HGNC: | 33340 |
UniProt: | Q1W6H9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.96e-17 | 42 |
epithelial cell | 6.38e-14 | 253 |
endodermal cell | 1.95e-13 | 58 |
acinar cell | 1.34e-08 | 5 |
respiratory epithelial cell | 1.42e-08 | 13 |
glandular epithelial cell | 2.18e-08 | 9 |
mammary gland epithelial cell | 1.04e-07 | 4 |
epithelial cell of alimentary canal | 1.88e-07 | 20 |
protein secreting cell | 4.66e-07 | 6 |
transitional epithelial cell | 5.97e-07 | 4 |
urothelial cell | 5.97e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.53e-11 | 160 |
endoderm | 1.53e-11 | 160 |
presumptive endoderm | 1.53e-11 | 160 |
digestive system | 3.24e-08 | 145 |
digestive tract | 3.24e-08 | 145 |
primitive gut | 3.24e-08 | 145 |
mammary gland | 1.04e-07 | 4 |
mammary bud | 1.04e-07 | 4 |
mammary ridge | 1.04e-07 | 4 |
mammary placode | 1.04e-07 | 4 |
subdivision of digestive tract | 1.83e-07 | 118 |
respiratory system | 2.70e-07 | 74 |
oral opening | 5.90e-07 | 22 |
orifice | 8.50e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 9.66e-07 | 4 |
breast cancer | 9.66e-07 | 4 |