FFCP PHASE1:Hg19::chr11:279384..279393,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=171389 | |EntrezGene=171389 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22944 | |HGNC=22944 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=325bp_to_ENST00000527946_5end | |association_with_transcript=325bp_to_ENST00000527946_5end | ||
|cluster_id=chr11:279384..279393,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_NLRP6_5end | |description=CAGE_peak_3_at_NLRP6_5end | ||
|id=chr11:279384..279393,+ | |id=chr11:279384..279393,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.63e-20!140;CL:0000094!6.46e-19!8;CL:0000037!1.01e-15!172;CL:0000566!1.01e-15!172;CL:0002393!1.89e-15!9;CL:0002397!1.89e-15!9;CL:0002087!7.08e-15!119;CL:0002032!1.31e-14!165;CL:0000837!1.31e-14!165;CL:0000988!2.52e-14!182;CL:0000766!2.77e-14!76;CL:0002057!1.42e-13!42;CL:0000081!2.00e-13!11;CL:0000860!2.07e-12!45;CL:0002031!9.21e-12!124;CL:0000775!1.10e-10!3;CL:0000875!5.41e-10!3;CL:0002396!5.41e-10!3;CL:0000791!5.77e-09!18;CL:0000789!5.77e-09!18;CL:0002420!5.77e-09!18;CL:0002419!5.77e-09!18;CL:0000790!5.77e-09!18;CL:0000763!7.50e-09!112;CL:0000049!7.50e-09!112;CL:0000771!1.07e-07!2;CL:0002194!1.27e-07!63;CL:0000576!1.27e-07!63;CL:0000040!1.27e-07!63;CL:0000559!1.27e-07!63;CL:0002009!2.77e-07!65 | |ontology_enrichment_celltype=CL:0000738!3.63e-20!140;CL:0000094!6.46e-19!8;CL:0000037!1.01e-15!172;CL:0000566!1.01e-15!172;CL:0002393!1.89e-15!9;CL:0002397!1.89e-15!9;CL:0002087!7.08e-15!119;CL:0002032!1.31e-14!165;CL:0000837!1.31e-14!165;CL:0000988!2.52e-14!182;CL:0000766!2.77e-14!76;CL:0002057!1.42e-13!42;CL:0000081!2.00e-13!11;CL:0000860!2.07e-12!45;CL:0002031!9.21e-12!124;CL:0000775!1.10e-10!3;CL:0000875!5.41e-10!3;CL:0002396!5.41e-10!3;CL:0000791!5.77e-09!18;CL:0000789!5.77e-09!18;CL:0002420!5.77e-09!18;CL:0002419!5.77e-09!18;CL:0000790!5.77e-09!18;CL:0000763!7.50e-09!112;CL:0000049!7.50e-09!112;CL:0000771!1.07e-07!2;CL:0002194!1.27e-07!63;CL:0000576!1.27e-07!63;CL:0000040!1.27e-07!63;CL:0000559!1.27e-07!63;CL:0002009!2.77e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.93e-37;8!CL:0000775;1.37e-36;3!CL:0000081;2.94e-27;11!CL:0000771;4.66e-25;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.93e-37,8;CL:0000775,1.45e-36,3;CL:0000081,2.94e-27,11;CL:0000771,4.38e-25,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.84e-19!15;UBERON:0000179!3.84e-19!15;UBERON:0000463!3.84e-19!15;UBERON:0002193!1.07e-16!112;UBERON:0002390!2.92e-16!102;UBERON:0003061!2.92e-16!102;UBERON:0002405!3.37e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.47e-61;15!UBERON:0000179;2.47e-61;15!UBERON:0000463;2.47e-61;15!UBERON:0002390;6.74e-26;32!UBERON:0002193;6.41e-18;42!UBERON:0000029;8.64e-13;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.66e-61,15;UBERON:0000179,2.66e-61,15;UBERON:0000463,2.66e-61,15;UBERON:0000029,7.68e-13,1;UBERON:0002193,2.06e-11,108;UBERON:0002390,1.92e-10,98;UBERON:0003061,1.92e-10,98;UBERON:0004535,1.45e-07,109;UBERON:0001009,2.48e-07,112;UBERON:0007023,3.44e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0,0,0.376484679085209,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.434377689410233,0.605399502633369,0,0,1.05627643155971,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0,0.855038231223746,0.99458338599545,0.547992461293902,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0,0,0.590129310341499,0,0.411202997999018,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0.444859689486181,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,23.2668158488995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0.128343036279748,0,0,0,0,0,11.2351053592077,17.9496875522415,14.5045429702612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,2.02979043692868,5.35246044999663,1.13929437434833,3.09701308095126,1.64544909234478,2.59389324477087,2.16012574895246,0,0,0,0,0,0.577076851905779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0,0,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0.248298857183432,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0,0,0.376484679085209,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.434377689410233,0.605399502633369,0,0,1.05627643155971,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0,0.855038231223746,0.99458338599545,0.547992461293902,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0,0,0.590129310341499,0,0.411202997999018,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0.444859689486181,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,23.2668158488995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0.128343036279748,0,0,0,0,0,11.2351053592077,17.9496875522415,14.5045429702612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,2.02979043692868,5.35246044999663,1.13929437434833,3.09701308095126,1.64544909234478,2.59389324477087,2.16012574895246,0,0,0,0,0,0.577076851905779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0,0,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0.248298857183432,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@NLRP6 | |short_description=p3@NLRP6 | ||
}} | }} |
Latest revision as of 12:42, 17 September 2015
Short description: | p3@NLRP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NLRP6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 325bp_to_ENST00000527946_5end |
EntrezGene: | NLRP6 |
HGNC: | 22944 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.93e-37 | 8 |
neutrophil | 1.45e-36 | 3 |
blood cell | 2.94e-27 | 11 |
eosinophil | 4.38e-25 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.66e-61 | 15 |
haemolymphatic fluid | 2.66e-61 | 15 |
organism substance | 2.66e-61 | 15 |
lymph node | 7.68e-13 | 1 |
hemolymphoid system | 2.06e-11 | 108 |
hematopoietic system | 1.92e-10 | 98 |
blood island | 1.92e-10 | 98 |
cardiovascular system | 1.45e-07 | 109 |
circulatory system | 2.48e-07 | 112 |
adult organism | 3.44e-07 | 114 |