FFCP PHASE1:Hg19::chr1:31842364..31842405,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:31842364..31842405,- to FFCP PHASE1:Hg19::chr1:31842364..31842405,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2170 | |EntrezGene=2170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3557 | |HGNC=3557 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_ENST00000497275_5end | |||
|cluster_id=chr1:31842364..31842405,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_2_at_FABP3_5end | |||
|id=chr1:31842364..31842405,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002504;8.24e-07;3!CL:1000279;8.24e-07;3!CL:1000280;8.24e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,6.69e-07,3;CL:1000279,6.69e-07,3;CL:1000280,6.69e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.32e-19!115;UBERON:0000468!4.39e-14!659;UBERON:0000033!2.49e-13!123;UBERON:0003075!2.65e-13!86;UBERON:0007284!2.65e-13!86;UBERON:0005743!2.92e-13!86;UBERON:0000153!3.72e-13!129;UBERON:0007811!3.72e-13!129;UBERON:0000922!4.44e-13!612;UBERON:0002346!5.63e-13!90;UBERON:0000481!9.38e-13!347;UBERON:0002616!9.40e-13!59;UBERON:0002020!1.36e-12!34;UBERON:0003528!1.36e-12!34;UBERON:0001049!2.09e-12!57;UBERON:0005068!2.09e-12!57;UBERON:0006241!2.09e-12!57;UBERON:0007135!2.09e-12!57;UBERON:0000955!3.84e-12!69;UBERON:0006238!3.84e-12!69;UBERON:0000064!4.84e-12!219;UBERON:0000062!5.18e-12!511;UBERON:0001017!6.48e-12!82;UBERON:0000475!6.68e-12!365;UBERON:0000073!1.25e-11!94;UBERON:0001016!1.25e-11!94;UBERON:0002619!1.36e-11!22;UBERON:0001869!1.77e-11!32;UBERON:0002050!2.85e-11!605;UBERON:0005423!2.85e-11!605;UBERON:0004121!3.38e-11!169;UBERON:0001893!3.51e-11!34;UBERON:0000924!4.03e-11!173;UBERON:0006601!4.03e-11!173;UBERON:0000923!6.78e-11!604;UBERON:0005291!6.78e-11!604;UBERON:0006598!6.78e-11!604;UBERON:0002532!6.78e-11!604;UBERON:0002791!8.34e-11!33;UBERON:0000956!2.37e-10!25;UBERON:0000203!2.37e-10!25;UBERON:0001950!2.69e-10!20;UBERON:0003056!4.36e-10!61;UBERON:0003080!9.49e-10!42;UBERON:0000467!1.20e-09!625;UBERON:0000480!1.57e-09!626;UBERON:0002780!3.14e-09!41;UBERON:0001890!3.14e-09!41;UBERON:0006240!3.14e-09!41;UBERON:0000483!2.68e-08!309;UBERON:0000119!3.76e-08!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;1.50e-07;3!UBERON:0003978;1.94e-07;3!UBERON:0000946;1.94e-07;3!UBERON:0007100;8.11e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.30e-09,114;UBERON:0004151,1.43e-07,3;UBERON:0003978,1.80e-07,3;UBERON:0009751,1.80e-07,3;UBERON:0000946,1.80e-07,3;UBERON:0002523,1.80e-07,3;UBERON:0005983,1.80e-07,3;UBERON:0002165,1.80e-07,3;UBERON:0002062,1.80e-07,3;UBERON:0007280,1.80e-07,3;UBERON:0010314,4.18e-07,132 | |||
|phase1_expression=0.908391896352783,6.20891519283851,0.986680828671798,2.00146596706261,5.36353313312745,0.872338524100369,2.53299878168311,3.15859936713415,1.56711376919903,0,0,0,0,1.98026164736075,0,0,0,0,0,0,0,0,0,0,0.376627918784408,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,1.34349284543955,0.971680998056939,1.28787783817093,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.567208902984407,0.443458794925128,0.263504357079378,0.196468613246569,0,0,1.29818957461873,1.74129737299267,6.38198210490553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.538842688278752,0.326923806226917,0,0,0,5.61888138294577,0.570471821544449,2.98897361103602,1.64408298101271,1.29498355494505,0.702254033511242,2.65400422631361,7.61572767332961,2.06651562351531,0,0,0,0,1.85169725349473,1.7516592782075,0,0.438977620880838,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0.365921118388786,0.397589304964456,0.232387885739037,0.829288440122964,0,0,0,0,0,0.464367928031979,28.8751792667834,0.354920400119532,0.337169380156203,0.241011029883482,0.220587945464788,0.871517776369625,0,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,1.03993478527958,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,1.8720341211139,2.37809859661965,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0.514137463516618,0.901029173531752,0.285826432630578,0,0,0.07333828582095,0,0,0,0.797814349754612,0,0,0,0,1.14382394926518,0,0,0.325736184293735,1.77695974371273,0,0,0,0,3.64871341923571,0,0,0.239624855491583,1.14861935834114,0,0.579125226670317,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,1.00034104211935,0.542530047399471,0,0.178428988797162,0,0,0,2.27407504055985,5.17365356462525,0,0.368738337083406,3.21469373531907,0.979005787313703,1.71571711905428,0,0,0,0.303127571446259,0,0.30239029332968,0.992431231275107,0.306923946576125,0.280660094433074,1.53766979106841,0.511707249066704,0.965123526861645,1.48418066444991,0,0,0.0821271560138091,1.55776328755086,0.116210378459959,0,0,0,0.229628896329213,0.728364672026868,0.786746489756545,0.451199612907412,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,1.28225062558195,0.656029291399411,0.650756789328606,0.206082023295445,0,0,0,0,0,0,0.770243085573222,0.614014698904518,1.37836572484531,0.966782203814463,2.17525040871343,0.852266274161009,0.979352392114111,0,0,0,0,0,0,0,0,0,0,0,0,6.69885064847401,1.89827654831236,0.953150969619124,0,4.70732886837312,0,0,2.87795932133304,9.33425901102586,2.94531005864216,0,0,0,0,0.243713489631284,0,0.272999822815972,0.707027159768564,0,0,0,0,1.73632660280006,15.0855792970726,0,0,0,0.430234056612155,0.0982490410131212,0,0.709522128141196,1.89996871767898,1.31717957183961,0.75894634753143,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,2.98244294329889,0.703347082052564,0,0,0,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,0.493217028184668,0,0,4.84666373047609,0.74214478529481,1.99613798001194,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0.361789315876224,1.52581736317083,0.221158519862449,0.591095237907095,0.87754158861589,0,0,0.615602068030377,0,0,0,1.19512109114209,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,12.0386647094818,0.937057782901357,0,0,0,1.57833761139756,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0.0967563312890851,0.0730893170861856,0,0.193978032976839,0,3.84167259326905,0,0,0.50648636764703,0.586654148204409,0,0,0.19980960958213,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0.136905378891993,0,1.28929632425987,0,12.8469904585237,15.3537484087828,5.74298419661451,13.1788140329334,55.7993862577542,14.059801818838,6.58398030369917,0,0,0,0.0824158583811665,0,0,0,2.38568906942791,1.22583065500418,0,0.275078873194468,2.07720169014593,0,0,0.242998226632099,0,0.86686278029118,0.209818352539992,0,0,0,61.4637980681096,47.0085298959456,0,0,0,1.63293680054705,0,0,0.170388021785422,0,0.146552233678082,0,1.29282956361551,1.45455861916959,0,0,0,0,2.07119527673598,0,0,0,0,0,0,0,0,0,2.65820453990096,4.27091927156871,0.625954653532499,1.14681839138014,0.665574309221114,0.18628920882415,0,0.124980407962107,0.303298235083296,0,0,0,0.434763085832475,0.149254802886874,0.701139929541673,0,2.08343305802598,1.25783950876288,0.889811221596536,0,2.11723293268535,0,0.591420599958536,0,0.449803112163605,0,0.829412415681711,0,0,0,0,0,0,0.322231671127465,0.928067519756987,0,4.40030541129469,0.343395705182793,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0,0,0.318004350653419,0,0,0.352675943690684,0.3062454773532,0.192687675289379,1.41696576325585,0.319267718114302,5.33302547025963,3.78107544332577,0.207471757392654,1.13032951942296,1.42769420259154,0,0,0.183428598521679,0,0,0,0.397832444232549,0,0,0,0,0,0,0.540300676947157,0.781078098613847,1.2401207790071,0.19024743058172,3.28184885410932,0,2.97726707033577,0.175871244359621,0,0,0,0,0,0,0,0,0.815636795721981,0.591954962065642,0,0,0.235479278551542,0.471346769748006,0,0,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0,0.691259661814092,0.430227358820278,0,0,0.846774100381858,0,0,0,1.23040974977572,0,0,14.8908632553216,3.38787262625615,2.3196288626764,5.34282092365053,0,0,0.475680363110274,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.588925401344836,0,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.430018749454354,0,0.475940431336403,3.05445483238264,0,0.371995018166751,0,1.73050624849516,0.504665699340316,0,0.380095503034311,0.407955318967927,0.534434810531121,3.49200618232411,0,0.151557396436479,0.267964130156178,0,0.20686599172379,7.24995538463335,1.42838658878244,0,0,0,0.0636471582781649,0,12.8452881259207,6.50243272062034,0.0673520530145875,0.143444410785353,1.33064142618405,0,0,0,0.0898252021065869,7.03922827210363,0.122241444182866,1.62758471326295,0,1.00636896795513,0 | |phase1_expression=0.908391896352783,6.20891519283851,0.986680828671798,2.00146596706261,5.36353313312745,0.872338524100369,2.53299878168311,3.15859936713415,1.56711376919903,0,0,0,0,1.98026164736075,0,0,0,0,0,0,0,0,0,0,0.376627918784408,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,1.34349284543955,0.971680998056939,1.28787783817093,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.567208902984407,0.443458794925128,0.263504357079378,0.196468613246569,0,0,1.29818957461873,1.74129737299267,6.38198210490553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.538842688278752,0.326923806226917,0,0,0,5.61888138294577,0.570471821544449,2.98897361103602,1.64408298101271,1.29498355494505,0.702254033511242,2.65400422631361,7.61572767332961,2.06651562351531,0,0,0,0,1.85169725349473,1.7516592782075,0,0.438977620880838,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0.365921118388786,0.397589304964456,0.232387885739037,0.829288440122964,0,0,0,0,0,0.464367928031979,28.8751792667834,0.354920400119532,0.337169380156203,0.241011029883482,0.220587945464788,0.871517776369625,0,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,1.03993478527958,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,1.8720341211139,2.37809859661965,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0.514137463516618,0.901029173531752,0.285826432630578,0,0,0.07333828582095,0,0,0,0.797814349754612,0,0,0,0,1.14382394926518,0,0,0.325736184293735,1.77695974371273,0,0,0,0,3.64871341923571,0,0,0.239624855491583,1.14861935834114,0,0.579125226670317,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,1.00034104211935,0.542530047399471,0,0.178428988797162,0,0,0,2.27407504055985,5.17365356462525,0,0.368738337083406,3.21469373531907,0.979005787313703,1.71571711905428,0,0,0,0.303127571446259,0,0.30239029332968,0.992431231275107,0.306923946576125,0.280660094433074,1.53766979106841,0.511707249066704,0.965123526861645,1.48418066444991,0,0,0.0821271560138091,1.55776328755086,0.116210378459959,0,0,0,0.229628896329213,0.728364672026868,0.786746489756545,0.451199612907412,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,1.28225062558195,0.656029291399411,0.650756789328606,0.206082023295445,0,0,0,0,0,0,0.770243085573222,0.614014698904518,1.37836572484531,0.966782203814463,2.17525040871343,0.852266274161009,0.979352392114111,0,0,0,0,0,0,0,0,0,0,0,0,6.69885064847401,1.89827654831236,0.953150969619124,0,4.70732886837312,0,0,2.87795932133304,9.33425901102586,2.94531005864216,0,0,0,0,0.243713489631284,0,0.272999822815972,0.707027159768564,0,0,0,0,1.73632660280006,15.0855792970726,0,0,0,0.430234056612155,0.0982490410131212,0,0.709522128141196,1.89996871767898,1.31717957183961,0.75894634753143,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,2.98244294329889,0.703347082052564,0,0,0,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,0.493217028184668,0,0,4.84666373047609,0.74214478529481,1.99613798001194,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0.361789315876224,1.52581736317083,0.221158519862449,0.591095237907095,0.87754158861589,0,0,0.615602068030377,0,0,0,1.19512109114209,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,12.0386647094818,0.937057782901357,0,0,0,1.57833761139756,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0.0967563312890851,0.0730893170861856,0,0.193978032976839,0,3.84167259326905,0,0,0.50648636764703,0.586654148204409,0,0,0.19980960958213,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0.136905378891993,0,1.28929632425987,0,12.8469904585237,15.3537484087828,5.74298419661451,13.1788140329334,55.7993862577542,14.059801818838,6.58398030369917,0,0,0,0.0824158583811665,0,0,0,2.38568906942791,1.22583065500418,0,0.275078873194468,2.07720169014593,0,0,0.242998226632099,0,0.86686278029118,0.209818352539992,0,0,0,61.4637980681096,47.0085298959456,0,0,0,1.63293680054705,0,0,0.170388021785422,0,0.146552233678082,0,1.29282956361551,1.45455861916959,0,0,0,0,2.07119527673598,0,0,0,0,0,0,0,0,0,2.65820453990096,4.27091927156871,0.625954653532499,1.14681839138014,0.665574309221114,0.18628920882415,0,0.124980407962107,0.303298235083296,0,0,0,0.434763085832475,0.149254802886874,0.701139929541673,0,2.08343305802598,1.25783950876288,0.889811221596536,0,2.11723293268535,0,0.591420599958536,0,0.449803112163605,0,0.829412415681711,0,0,0,0,0,0,0.322231671127465,0.928067519756987,0,4.40030541129469,0.343395705182793,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0,0,0.318004350653419,0,0,0.352675943690684,0.3062454773532,0.192687675289379,1.41696576325585,0.319267718114302,5.33302547025963,3.78107544332577,0.207471757392654,1.13032951942296,1.42769420259154,0,0,0.183428598521679,0,0,0,0.397832444232549,0,0,0,0,0,0,0.540300676947157,0.781078098613847,1.2401207790071,0.19024743058172,3.28184885410932,0,2.97726707033577,0.175871244359621,0,0,0,0,0,0,0,0,0.815636795721981,0.591954962065642,0,0,0.235479278551542,0.471346769748006,0,0,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0,0.691259661814092,0.430227358820278,0,0,0.846774100381858,0,0,0,1.23040974977572,0,0,14.8908632553216,3.38787262625615,2.3196288626764,5.34282092365053,0,0,0.475680363110274,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.588925401344836,0,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.430018749454354,0,0.475940431336403,3.05445483238264,0,0.371995018166751,0,1.73050624849516,0.504665699340316,0,0.380095503034311,0.407955318967927,0.534434810531121,3.49200618232411,0,0.151557396436479,0.267964130156178,0,0.20686599172379,7.24995538463335,1.42838658878244,0,0,0,0.0636471582781649,0,12.8452881259207,6.50243272062034,0.0673520530145875,0.143444410785353,1.33064142618405,0,0,0,0.0898252021065869,7.03922827210363,0.122241444182866,1.62758471326295,0,1.00636896795513,0 | ||
|short_description=p2@FABP3 | |||
}} | }} |
Latest revision as of 13:04, 17 September 2015
Short description: | p2@FABP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FABP3_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 31bp_to_ENST00000497275_5end |
EntrezGene: | FABP3 |
HGNC: | 3557 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 6.69e-07 | 3 |
smooth muscle cell of large intestine | 6.69e-07 | 3 |
smooth muscle cell of colon | 6.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.30e-09 | 114 |
cardiac chamber | 1.43e-07 | 3 |
valve | 1.80e-07 | 3 |
cardiac mesenchyme | 1.80e-07 | 3 |
cardial valve | 1.80e-07 | 3 |
tunica intima | 1.80e-07 | 3 |
heart layer | 1.80e-07 | 3 |
endocardium | 1.80e-07 | 3 |
endocardial cushion | 1.80e-07 | 3 |
presumptive endocardium | 1.80e-07 | 3 |
structure with developmental contribution from neural crest | 4.18e-07 | 132 |