FFCP PHASE1:Hg19::chr11:2924521..2924577,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5002 | |EntrezGene=5002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10964 | |HGNC=10964 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-28bp_to_ENST00000492567_5end | |association_with_transcript=-28bp_to_ENST00000492567_5end | ||
|cluster_id=chr11:2924521..2924577,+ | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_2_at_SLC22A18_5end | |description=CAGE_peak_2_at_SLC22A18_5end | ||
|id=chr11:2924521..2924577,+ | |id=chr11:2924521..2924577,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.17e-10!254;CL:0000223!5.37e-10!59;CL:0000181!5.41e-10!12;CL:0000417!5.41e-10!12;CL:0000668!5.41e-10!12;CL:0000414!5.41e-10!12;CL:0000412!5.41e-10!12;CL:0000182!5.41e-10!12 | |ontology_enrichment_celltype=CL:0000066!5.17e-10!254;CL:0000223!5.37e-10!59;CL:0000181!5.41e-10!12;CL:0000417!5.41e-10!12;CL:0000668!5.41e-10!12;CL:0000414!5.41e-10!12;CL:0000412!5.41e-10!12;CL:0000182!5.41e-10!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;8.63e-16;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.71e-16,12;CL:0000223,6.43e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0003104;7.69e-19;31!UBERON:0009497;1.11e-18;13!UBERON:0004161;3.73e-17;11!UBERON:0001041;2.23e-11;30!UBERON:0006595;4.13e-07;86 | |||
|ontology_enrichment_disease=DOID:305!4.19e-10!106;DOID:0050687!8.41e-10!143 | |ontology_enrichment_disease=DOID:305!4.19e-10!106;DOID:0050687!8.41e-10!143 | ||
|ontology_enrichment_disease_v019=DOID:4929;9.76e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.04e-08,2;DOID:305,9.91e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0009856!1.41e-12!26;UBERON:0004921!2.21e-12!129;UBERON:0004185!2.21e-12!129;UBERON:0009497!1.24e-11!25;UBERON:0000015!1.24e-11!25;UBERON:0002423!1.24e-11!25;UBERON:0006235!1.24e-11!25;UBERON:0004161!1.24e-11!25;UBERON:0005409!1.39e-11!35;UBERON:0007499!1.91e-11!25;UBERON:0009854!3.04e-11!23;UBERON:0000160!3.32e-11!27;UBERON:0001007!3.48e-11!155;UBERON:0001555!3.48e-11!155;UBERON:0007026!3.48e-11!155;UBERON:0008835!4.07e-10!22;UBERON:0003894!4.07e-10!22;UBERON:0004119!1.14e-09!169;UBERON:0000925!1.14e-09!169;UBERON:0006595!1.14e-09!169;UBERON:0000059!9.09e-09!11;UBERON:0002107!1.31e-08!19;UBERON:0006925!1.31e-08!19;UBERON:0008836!1.31e-08!19;UBERON:0003929!2.62e-08!54;UBERON:0000077!2.63e-08!130;UBERON:0004907!3.56e-08!5;UBERON:0005911!3.38e-07!82;UBERON:0001052!9.66e-07!4 | |ontology_enrichment_uberon=UBERON:0009856!1.41e-12!26;UBERON:0004921!2.21e-12!129;UBERON:0004185!2.21e-12!129;UBERON:0009497!1.24e-11!25;UBERON:0000015!1.24e-11!25;UBERON:0002423!1.24e-11!25;UBERON:0006235!1.24e-11!25;UBERON:0004161!1.24e-11!25;UBERON:0005409!1.39e-11!35;UBERON:0007499!1.91e-11!25;UBERON:0009854!3.04e-11!23;UBERON:0000160!3.32e-11!27;UBERON:0001007!3.48e-11!155;UBERON:0001555!3.48e-11!155;UBERON:0007026!3.48e-11!155;UBERON:0008835!4.07e-10!22;UBERON:0003894!4.07e-10!22;UBERON:0004119!1.14e-09!169;UBERON:0000925!1.14e-09!169;UBERON:0006595!1.14e-09!169;UBERON:0000059!9.09e-09!11;UBERON:0002107!1.31e-08!19;UBERON:0006925!1.31e-08!19;UBERON:0008836!1.31e-08!19;UBERON:0003929!2.62e-08!54;UBERON:0000077!2.63e-08!130;UBERON:0004907!3.56e-08!5;UBERON:0005911!3.38e-07!82;UBERON:0001052!9.66e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.28e-31;22!UBERON:0000160;2.70e-30;17!UBERON:0002423;6.15e-21;25!UBERON:0004921;1.83e-18;33!UBERON:0000059;2.27e-17;11!UBERON:0002107;5.22e-16;19!UBERON:0006925;5.22e-16;19!UBERON:0002108;2.29e-13;4!UBERON:0004907;8.08e-13;5!UBERON:0001007;1.33e-11;81!UBERON:0001155;2.08e-11;9!UBERON:0001052;2.19e-09;4!UBERON:0002365;6.18e-09;31!UBERON:0002330;6.18e-09;31!UBERON:0002368;7.85e-08;33!UBERON:0005172;1.07e-07;52!UBERON:0005173;1.07e-07;52!UBERON:0002417;6.57e-07;58!UBERON:0000916;6.57e-07;58!UBERON:0000949;7.39e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.92e-30,17;UBERON:0005409,1.50e-27,25;UBERON:0009856,2.08e-23,26;UBERON:0009854,6.40e-23,23;UBERON:0004921,1.27e-21,118;UBERON:0009497,5.82e-21,25;UBERON:0000015,5.82e-21,25;UBERON:0002423,5.82e-21,25;UBERON:0006235,5.82e-21,25;UBERON:0004161,5.82e-21,25;UBERON:0007499,9.41e-21,25;UBERON:0008835,3.52e-20,22;UBERON:0003894,3.52e-20,22;UBERON:0001007,8.80e-18,145;UBERON:0001555,8.80e-18,145;UBERON:0007026,8.80e-18,145;UBERON:0000059,2.33e-17,11;UBERON:0002107,4.76e-16,19;UBERON:0006925,4.76e-16,19;UBERON:0008836,4.76e-16,19;UBERON:0004119,1.86e-15,160;UBERON:0000925,1.86e-15,160;UBERON:0006595,1.86e-15,160;UBERON:0003929,1.73e-13,54;UBERON:0002108,2.44e-13,4;UBERON:0005172,2.55e-13,54;UBERON:0005173,2.55e-13,54;UBERON:0004907,8.34e-13,5;UBERON:0005911,1.18e-11,82;UBERON:0002417,1.20e-11,60;UBERON:0000916,1.20e-11,60;UBERON:0001155,2.06e-11,9;UBERON:0005177,5.50e-11,101;UBERON:0001052,2.32e-09,4;UBERON:0001041,2.76e-09,87;UBERON:0002365,3.48e-09,31;UBERON:0002330,3.48e-09,31;UBERON:0011216,6.18e-09,223;UBERON:0009569,2.41e-08,112;UBERON:0002368,5.99e-08,35;UBERON:0000949,3.12e-07,45;UBERON:0003104,7.77e-07,160;UBERON:0009142,7.77e-07,160 | |||
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|short_description=p2@SLC22A18 | |short_description=p2@SLC22A18 | ||
}} | }} |
Latest revision as of 13:16, 17 September 2015
Short description: | p2@SLC22A18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC22A18_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | -28bp_to_ENST00000492567_5end |
EntrezGene: | SLC22A18 |
HGNC: | 10964 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.71e-16 | 12 |
endodermal cell | 6.43e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.04e-08 | 2 |
carcinoma | 9.91e-08 | 106 |