FFCP PHASE1:Hg19::chr15:40886439..40886493,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57082 | |EntrezGene=57082 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24054 | |HGNC=24054 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NG31 | |UniProt=Q8NG31 | ||
|association_with_transcript=0bp_to_ENST00000399668,ENST00000532056,ENST00000533001,ENST00000534204,NM_144508,NM_170589,uc001zme.2,uc010bbs.1,uc010bbt.1,uc010ucq.1_5end | |association_with_transcript=0bp_to_ENST00000399668,ENST00000532056,ENST00000533001,ENST00000534204,NM_144508,NM_170589,uc001zme.2,uc010bbs.1,uc010bbt.1,uc010ucq.1_5end | ||
|cluster_id=chr15:40886439..40886493,+ | |||
|coexpression_cluster_id=C109 | |coexpression_cluster_id=C109 | ||
|description=CAGE_peak_1_at_CASC5_5end | |description=CAGE_peak_1_at_CASC5_5end | ||
|id=chr15:40886439..40886493,+ | |id=chr15:40886439..40886493,+ | ||
|ontology_enrichment_celltype=CL:0000012!1.31e-12!682;CL:0000548!1.98e-12!679;CL:0000004!1.98e-12!679;CL:0000255!1.98e-12!679;CL:0000066!9.53e-08!254;CL:0000003!1.74e-07!722 | |ontology_enrichment_celltype=CL:0000012!1.31e-12!682;CL:0000548!1.98e-12!679;CL:0000004!1.98e-12!679;CL:0000255!1.98e-12!679;CL:0000066!9.53e-08!254;CL:0000003!1.74e-07!722 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.33e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.46e-48!235;DOID:14566!3.13e-47!239;DOID:0050686!1.39e-25!137;DOID:0050687!3.43e-22!143;DOID:2531!3.30e-21!51;DOID:0060083!3.30e-21!51;DOID:1240!5.54e-18!39;DOID:305!2.28e-16!106;DOID:8692!1.05e-13!31 | |ontology_enrichment_disease=DOID:162!1.46e-48!235;DOID:14566!3.13e-47!239;DOID:0050686!1.39e-25!137;DOID:0050687!3.43e-22!143;DOID:2531!3.30e-21!51;DOID:0060083!3.30e-21!51;DOID:1240!5.54e-18!39;DOID:305!2.28e-16!106;DOID:8692!1.05e-13!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.33e-14;39!DOID:2531;1.96e-13;51!DOID:0060083;1.96e-13;51!DOID:8692;1.96e-13;31!DOID:0050686;9.22e-07;137 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.45e-49,235;DOID:14566,1.44e-47,239;DOID:0050686,6.56e-26,137;DOID:0050687,2.19e-22,143;DOID:2531,1.85e-21,51;DOID:0060083,1.85e-21,51;DOID:1240,3.41e-18,39;DOID:305,1.48e-16,106;DOID:8692,7.31e-14,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@CASC5 | |short_description=p1@CASC5 | ||
}} | }} |
Latest revision as of 13:31, 17 September 2015
Short description: | p1@CASC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CASC5_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000399668, ENST00000532056, ENST00000533001, ENST00000534204, NM_144508, NM_170589, uc001zme.2, uc010bbs.1, uc010bbt.1, uc010ucq.1_5end |
EntrezGene: | CASC5 |
HGNC: | 24054 |
UniProt: | Q8NG31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.33e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.45e-49 | 235 |
disease of cellular proliferation | 1.44e-47 | 239 |
organ system cancer | 6.56e-26 | 137 |
cell type cancer | 2.19e-22 | 143 |
hematologic cancer | 1.85e-21 | 51 |
immune system cancer | 1.85e-21 | 51 |
leukemia | 3.41e-18 | 39 |
carcinoma | 1.48e-16 | 106 |
myeloid leukemia | 7.31e-14 | 31 |