FFCP PHASE1:Hg19::chr13:46785977..46785994,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3936 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6528 | |||
|TSSclassifier=strong | |||
|UniProt=Q5TBN5 | |||
|association_with_transcript=11bp_to_ENST00000442275_5end | |||
|cluster_id=chr13:46785977..46785994,- | |||
|description=CAGE_peak_26_at_LCP1_5end | |||
|id=chr13:46785977..46785994,- | |||
|ontology_enrichment_celltype=CL:0000037!1.37e-09!172;CL:0000566!1.37e-09!172;CL:0000738!1.73e-08!140;CL:0000988!3.47e-08!182;CL:0002032!7.94e-08!165;CL:0000837!7.94e-08!165;CL:0002031!1.19e-07!124;CL:0000791!7.44e-07!18;CL:0000789!7.44e-07!18;CL:0002420!7.44e-07!18;CL:0002419!7.44e-07!18;CL:0000790!7.44e-07!18;CL:0002087!8.55e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000097;9.69e-10;5!CL:0002363;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.01e-09,5;CL:0002028,1.01e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.98e-16;3!UBERON:0003057;3.98e-16;3!UBERON:0006298;2.46e-12;1!UBERON:0008801;2.46e-12;1!UBERON:0007297;4.82e-07;2!CL:0000008;8.52e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.49e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;6.82e-23;2!UBERON:0001044;2.96e-17;6!UBERON:0003293;2.96e-17;6!UBERON:0003294;2.96e-17;6!UBERON:0010047;2.96e-17;6!UBERON:0003408;2.96e-17;6!UBERON:0000167;2.96e-17;6!UBERON:0002240;3.98e-16;3!UBERON:0005174;3.98e-16;3!UBERON:0001137;3.98e-16;3!UBERON:0001301;7.88e-13;1!UBERON:0001831;2.46e-12;1!UBERON:0001736;2.46e-12;1!UBERON:0001567;2.46e-12;1!UBERON:0002298;2.91e-08;6!UBERON:0001041;1.04e-07;14!UBERON:0002148;8.52e-07;2!UBERON:0003566;8.52e-07;2!UBERON:0006331;8.52e-07;2!UBERON:0009662;8.52e-07;2!UBERON:0001777;8.52e-07;2!UBERON:0004089;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,6.84e-23,2;UBERON:0001044,2.97e-17,6;UBERON:0003293,2.97e-17,6;UBERON:0003294,2.97e-17,6;UBERON:0010047,2.97e-17,6;UBERON:0000167,2.97e-17,6;UBERON:0002240,3.98e-16,3;UBERON:0005174,3.98e-16,3;UBERON:0001137,3.98e-16,3;UBERON:0001301,7.89e-13,1;UBERON:0001736,1.96e-12,1;UBERON:0006298,1.96e-12,1;UBERON:0001831,3.08e-12,1;UBERON:0001567,3.08e-12,1;UBERON:0008801,3.08e-12,1;UBERON:0003076,3.14e-12,15;UBERON:0003057,3.14e-12,15;UBERON:0003408,1.37e-10,10;UBERON:0002298,2.43e-08,6;UBERON:0002148,6.07e-07,2;UBERON:0006331,6.07e-07,2;UBERON:0009662,6.07e-07,2;UBERON:0004089,9.54e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,0.587200878669695,0.553995408531877,0.802177789880567,1.08505435357926,0,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0.689491361473237,0,0,0.376484679085209,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0.112328631146495,0,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.590129310341499,0.393010762749165,1.85041349099558,0,0.651844533267181,0,0,0,0.294605907474837,0,0.270803863765016,0.128091319725675,0.520237390239513,0.164437904603676,0,0.579606171470105,1.18629250529648,0.267540828089713,0,0.453237370790265,0,0.34362744548263,0.759059076058509,0,0,0,0.301150238155546,0.383959833463255,0,0,0,0.604820229674197,0.802320587350522,0.724122019413995,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0,0.196468613246569,0,0,0,0.174129737299267,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,1.86595303986695,1.00883967391873,0.25248486685276,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.896681151948218,0.394061520403854,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0.256450125116389,0,0,0.309123034943167,0,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0.371606350251437,0,0.0711418433484141,0,0,0.383010740264733,0,0.649243880549111,0,0,0.313359791546046,0,0.338583555603207,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0,0.390776190804081,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0.552567831062295,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.269272933229316,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.520679215005393,0,0,3.14508002835654,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.182248669974074,0,0,0,0,6.27505687664957,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,1.93924434542326,0.26446520348538,0,0,0.106787412567695,0,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0,0,0,0.1251909307065,1.14681839138014,0.221858103073705,0.248385611765534,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0.449803112163605,0.310525913752519,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0.132864840313363,0,0,0,0,0.19998739585493,0.213383459388282,0.172214979660816,0,0,0,0,0,0,0.471797825567689,0,1.69732529954025,0.850299680406731,0.371807292777007,0.558644917973244,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0.0752103283492573,0,0,0.523813388962845,0,0,0.0675375846183947,0,0,0.0634158101939068,0,1.09651553371436,0.496211178389294,0,0,0,0,0,0.227662191351298,0.620916591138472,0.230467975111559,0,0.271878931907327,0.0657727735628491,0.118193840883968,0,0.235479278551542,0,0.280272163313789,0.913158720509496,0,0,1.85839014859306,0.158013611732727,0,0.173858272302579,0,0,0,0,2.15113679410139,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,2.1593931382644,0.297046400327086,2.113278637917,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,1.83491713361816,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0.218531143927391,1.0135880080915,0.101988829741982,0,0,0,0.151557396436479,0.535928260312357,0,0.103432995861895,0,0,0.581300188524055,0.682821857254437,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p26@LCP1 | |||
}} |
Latest revision as of 13:46, 17 September 2015
Short description: | p26@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_LCP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000442275_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | Q5TBN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.01e-09 | 5 |
basophil mast progenitor cell | 1.01e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 6.84e-23 | 2 |
saliva-secreting gland | 2.97e-17 | 6 |
gland of oral region | 2.97e-17 | 6 |
gland of foregut | 2.97e-17 | 6 |
oral gland | 2.97e-17 | 6 |
oral cavity | 2.97e-17 | 6 |
spinal cord | 3.98e-16 | 3 |
dorsal region element | 3.98e-16 | 3 |
dorsum | 3.98e-16 | 3 |
epididymis | 7.89e-13 | 1 |
submandibular gland | 1.96e-12 | 1 |
submandibular gland primordium | 1.96e-12 | 1 |
parotid gland | 3.08e-12 | 1 |
cheek | 3.08e-12 | 1 |
parotid gland primordium | 3.08e-12 | 1 |
posterior neural tube | 3.14e-12 | 15 |
chordal neural plate | 3.14e-12 | 15 |
gland of gut | 1.37e-10 | 10 |
brainstem | 2.43e-08 | 6 |
locus ceruleus | 6.07e-07 | 2 |
brainstem nucleus | 6.07e-07 | 2 |
hindbrain nucleus | 6.07e-07 | 2 |
midface | 9.54e-07 | 2 |