FFCP PHASE1:Hg19::chr15:41136734..41136749,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:41136734..41136749,+
|short_description=p9@SPINT1
|description=CAGE_peak_9_at_SPINT1_5end
|association_with_transcript=46bp_to_uc010ucs.1_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6692 | |EntrezGene=6692 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11246 | |HGNC=11246 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=46bp_to_uc010ucs.1_5end | |||
|cluster_id=chr15:41136734..41136749,+ | |||
|coexpression_cluster_id=C543 | |||
|description=CAGE_peak_9_at_SPINT1_5end | |||
|id=chr15:41136734..41136749,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.06e-19!254;CL:0002076!7.72e-15!43;CL:0000223!1.70e-11!59;CL:0002368!3.20e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:1000415;2.00e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.66e-10,2;CL:0000066,4.24e-08,253;CL:0002076,1.56e-07,42;CL:0000223,1.62e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0006595;6.92e-07;86 | |||
|ontology_enrichment_disease=DOID:305!2.92e-16!106;DOID:1749!4.64e-12!14;DOID:0050687!4.39e-11!143;DOID:299!1.04e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;4.78e-11;4!DOID:1612;4.78e-11;4!DOID:299;3.78e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.49e-11,4;DOID:1612,2.49e-11,4;DOID:305,2.92e-11,106;DOID:0050687,3.02e-08,143;DOID:299,4.63e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.71e-21!169;UBERON:0000925!2.71e-21!169;UBERON:0006595!2.71e-21!169;UBERON:0001007!3.67e-16!155;UBERON:0001555!3.67e-16!155;UBERON:0007026!3.67e-16!155;UBERON:0004921!3.29e-14!129;UBERON:0004185!3.29e-14!129;UBERON:0000464!3.43e-12!104;UBERON:0000077!3.94e-12!130;UBERON:0005911!7.46e-12!82;UBERON:0000466!9.61e-11!126;UBERON:0006554!1.54e-10!44;UBERON:0001008!3.77e-10!45;UBERON:0001004!1.92e-09!72;UBERON:0005153!1.42e-08!37;UBERON:0000058!1.97e-08!26;UBERON:0000065!8.66e-08!53;UBERON:0005177!1.81e-07!107;UBERON:0000344!1.82e-07!12;UBERON:0003064!2.07e-07!37;UBERON:0001046!2.98e-07!19;UBERON:0005409!3.36e-07!35;UBERON:0005156!3.63e-07!59;UBERON:0000990!3.63e-07!59;UBERON:0000365!4.60e-07!5;UBERON:0002294!4.64e-07!7;UBERON:0001173!4.64e-07!7;UBERON:0004912!4.64e-07!7;UBERON:0005178!6.13e-07!34;UBERON:0002224!6.13e-07!34;UBERON:0000161!6.69e-07!35;UBERON:0000160!8.03e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;5.93e-18;33!UBERON:0005409;9.30e-15;22!UBERON:0000160;7.74e-12;17!UBERON:0002294;5.69e-11;7!UBERON:0001173;5.69e-11;7!UBERON:0001041;7.49e-08;14!UBERON:0000058;1.55e-07;10!UBERON:0002110;3.22e-07;3!UBERON:0000059;3.82e-07;11!UBERON:0001555;5.80e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.06e-15,160;UBERON:0000925,8.06e-15,160;UBERON:0006595,8.06e-15,160;UBERON:0005409,5.78e-13,25;UBERON:0001007,1.17e-12,145;UBERON:0001555,1.17e-12,145;UBERON:0007026,1.17e-12,145;UBERON:0004921,2.89e-12,118;UBERON:0000160,6.14e-12,17;UBERON:0005911,2.39e-09,82;UBERON:0002294,1.89e-08,9;UBERON:0001173,1.89e-08,9;UBERON:0004912,1.89e-08,9;UBERON:0002110,2.85e-07,3;UBERON:0006242,2.85e-07,3;UBERON:0000059,3.77e-07,11 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,2.79120467188971,0.436882744260345,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0.154816123316076,0,0.6024118375565,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0.221729397462564,0,0.196468613246569,0,0.370784442784429,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0,0.265059536642971,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59884970106048,0,0.329250856225877,0,0.100528972411631,0.555530670951178,0,0,0,0,0.117408694235822,0,0,0,0,1.71697232418975,0,0,0,0,0.335964256397719,0,0.358234090811393,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,1.80455823272956,0.368323955743585,0,0,0,0.902399225814824,0.462092022626489,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0.764628819135115,2.49322802678617,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.384380134730212,0.127612712494584,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,2.68120910214315,0,0.659006605437454,0.43050537267123,3.36942951335251,2.66058092122005,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.71623345421307,0.890894042497916,0.614321404198464,0,0,0,0,0.211125408127993,0.19924798825107,0.552567831062295,0,0,0,0,0.629078458031288,2.32727527078292,0,0.197286811273867,0,0,0,0,0,1.30213880542617,2.71125999988207,0,1.0241410345695,1.5255219017566,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.307801034015188,0,0.69169171316418,0.628303510868405,1.19512109114209,0,1.19076871422421,0,0,0,0,0,0,0,0,0,0,1.14262965711403,2.40300221437699,0,0.995261931078505,2.21143911258348,2.4441205797345,0,0,0,0,0,0,0,0.19566461893209,0,1.18375320854817,0,0,0,0,0,0,0,0,0,2.27687636823834,0,0.520679215005393,0.783939179315021,0.435296032902013,0.34945333648406,0,0,0,0,1.74580229679155,0,0,0,0,0,2.34661659281764,1.36269994427607,0.213452994739353,0,1.15272333723285,0,0,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0.798716001995964,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0.137539436597234,0.83088067605837,0,0,0,0.335434687599266,0.709251365692784,0.83927341015997,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.427149650270779,0.157204305099666,1.24271716604159,0,0,0,0.638341257770182,0,0,0,0,0.471162288750703,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0.633936370075881,0,0,0,0,0,0.979156554036111,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.235939446695481,0,0.462102664601353,0,0,0,0.150420656698515,0,0.781514011233092,1.04762677792569,0,1.03499260351932,0,0,0,0,0,1.09651553371436,0,0,5.74930924378179,0,0,0,0,1.24183318227694,0,0,0,0,0.118193840883968,0.556157009460346,0.313972371402056,0,1.40136081656895,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,1.29068207646083,0,0,0.846774100381858,0.4582137370881,0,0,0.782988022584546,0.392600934460972,0.365753774946808,0,0,0,0,1.16969731731053,0.198950775161368,0,0,0,1.35866559210006,1.92935395269862,0.655678681511872,0.470317296361523,0,0.942706188406504,0,0,0,0,0,0,0,1.2498775702396,0.352894871715692,0.320965466756673,1.46067277649303,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0.407955318967927,0,0.643264296743914,0,0.151557396436479,0,0,0,0.426467963801962,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.381882949668989,1.0105859447911,0.435433495793923,0,0.80822463617505,0.717222053926764,0.665320713092027,0.569822880276821,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | ||
|short_description=p9@SPINT1 | |||
}} | }} |
Latest revision as of 14:04, 17 September 2015
Short description: | p9@SPINT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SPINT1_5end |
Coexpression cluster: | C543_Alveolar_Corneal_Urothelial_amniotic_Esophageal_Tracheal_esophagus |
Association with transcript: | 46bp_to_uc010ucs.1_5end |
EntrezGene: | SPINT1 |
HGNC: | 11246 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.66e-10 | 2 |
epithelial cell | 4.24e-08 | 253 |
endo-epithelial cell | 1.56e-07 | 42 |
endodermal cell | 1.62e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.06e-15 | 160 |
endoderm | 8.06e-15 | 160 |
presumptive endoderm | 8.06e-15 | 160 |
gastrointestinal system | 5.78e-13 | 25 |
digestive system | 1.17e-12 | 145 |
digestive tract | 1.17e-12 | 145 |
primitive gut | 1.17e-12 | 145 |
subdivision of digestive tract | 2.89e-12 | 118 |
intestine | 6.14e-12 | 17 |
endo-epithelium | 2.39e-09 | 82 |
biliary system | 1.89e-08 | 9 |
biliary tree | 1.89e-08 | 9 |
biliary bud | 1.89e-08 | 9 |
gallbladder | 2.85e-07 | 3 |
gall bladder primordium | 2.85e-07 | 3 |
large intestine | 3.77e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.49e-11 | 4 |
breast cancer | 2.49e-11 | 4 |
carcinoma | 2.92e-11 | 106 |
cell type cancer | 3.02e-08 | 143 |
adenocarcinoma | 4.63e-08 | 25 |