FFCP PHASE1:Hg19::chr7:18535414..18535421,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9734 | |EntrezGene=9734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14065 | |HGNC=14065 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000461409_5end | |association_with_transcript=30bp_to_ENST00000461409_5end | ||
|cluster_id=chr7:18535414..18535421,+ | |||
|description=CAGE_peak_22_at_HDAC9_5end | |description=CAGE_peak_22_at_HDAC9_5end | ||
|id=chr7:18535414..18535421,+ | |id=chr7:18535414..18535421,+ | ||
|ontology_enrichment_celltype=CL:0002605!4.90e-07!3 | |ontology_enrichment_celltype=CL:0002605!4.90e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.35e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.09e-23;1!DOID:4549;2.09e-23;1!DOID:5861;2.09e-23;1!DOID:6496;2.09e-23;1!DOID:12603;4.59e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.67e-23,1;DOID:4549,1.67e-23,1;DOID:5861,1.67e-23,1;DOID:6496,1.67e-23,1;DOID:12603,5.13e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.23e-38!57;UBERON:0005068!1.23e-38!57;UBERON:0006241!1.23e-38!57;UBERON:0007135!1.23e-38!57;UBERON:0002780!8.97e-35!41;UBERON:0001890!8.97e-35!41;UBERON:0006240!8.97e-35!41;UBERON:0002616!1.13e-34!59;UBERON:0001017!1.62e-34!82;UBERON:0001893!1.82e-34!34;UBERON:0000073!3.45e-34!94;UBERON:0001016!3.45e-34!94;UBERON:0005743!7.88e-34!86;UBERON:0003080!9.87e-34!42;UBERON:0002791!5.85e-33!33;UBERON:0002020!5.70e-32!34;UBERON:0003528!5.70e-32!34;UBERON:0001869!1.69e-31!32;UBERON:0000955!3.37e-31!69;UBERON:0006238!3.37e-31!69;UBERON:0003075!6.58e-30!86;UBERON:0007284!6.58e-30!86;UBERON:0000956!1.18e-29!25;UBERON:0000203!1.18e-29!25;UBERON:0002346!1.41e-29!90;UBERON:0003056!1.74e-26!61;UBERON:0002619!1.66e-24!22;UBERON:0000924!4.42e-23!173;UBERON:0006601!4.42e-23!173;UBERON:0004121!6.19e-23!169;UBERON:0001950!1.69e-21!20;UBERON:0007023!1.23e-20!115;UBERON:0000033!3.51e-19!123;UBERON:0000153!1.08e-17!129;UBERON:0007811!1.08e-17!129;UBERON:0001872!4.93e-10!5;UBERON:0000025!2.90e-08!194;UBERON:0001871!9.94e-08!7;UBERON:0000200!1.31e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;3.06e-12;2!UBERON:0010225;3.06e-12;2!UBERON:0002418;1.04e-08;3!UBERON:0004755;1.04e-08;3!UBERON:0000178;7.41e-07;15!UBERON:0000179;7.41e-07;15!UBERON:0000463;7.41e-07;15!UBERON:0002784;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,2.59e-12,2;UBERON:0010225,2.59e-12,2;UBERON:0002418,9.66e-09,3;UBERON:0004755,9.66e-09,3;UBERON:0000178,7.63e-07,15;UBERON:0000179,7.63e-07,15;UBERON:0000463,7.63e-07,15;UBERON:0002784,8.61e-07,4 | |||
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| ||
|short_description=p22@HDAC9 | |short_description=p22@HDAC9 | ||
}} | }} |
Latest revision as of 14:15, 17 September 2015
Short description: | p22@HDAC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_HDAC9_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000461409_5end |
EntrezGene: | HDAC9 |
HGNC: | 14065 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dorsal plus ventral thalamus | 2.59e-12 | 2 |
thalamic complex | 2.59e-12 | 2 |
cartilage tissue | 9.66e-09 | 3 |
skeletal tissue | 9.66e-09 | 3 |
blood | 7.63e-07 | 15 |
haemolymphatic fluid | 7.63e-07 | 15 |
organism substance | 7.63e-07 | 15 |
regional part of diencephalon | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.67e-23 | 1 |
extraosseous chondrosarcoma | 1.67e-23 | 1 |
myxoid chondrosarcoma | 1.67e-23 | 1 |
extraskeletal myxoid chondrosarcoma | 1.67e-23 | 1 |
acute leukemia | 5.13e-23 | 1 |