FFCP PHASE1:Hg19::chr7:18535633..18535643,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9734 | |EntrezGene=9734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14065 | |HGNC=14065 | ||
|TSSclassifier=strong | |||
|UniProt=B5MCF1 | |UniProt=B5MCF1 | ||
|association_with_transcript=-146bp_to_ENST00000406072_5end | |association_with_transcript=-146bp_to_ENST00000406072_5end | ||
|cluster_id=chr7:18535633..18535643,+ | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_30_at_HDAC9_5end | |description=CAGE_peak_30_at_HDAC9_5end | ||
|id=chr7:18535633..18535643,+ | |id=chr7:18535633..18535643,+ | ||
|ontology_enrichment_celltype=CL:0000138;7.67e-18;6!CL:0000153;2.19e-12;9!CL:0000447;2.19e-12;9!CL:0000327;5.55e-08;15 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000138;7.67e-18;6!CL:0000153;2.19e-12;9!CL:0000447;2.19e-12;9!CL:0000327;5.55e-08;15 | ||
|ontology_enrichment_disease=DOID:3371;9.37e-99;1!DOID:4549;9.37e-99;1!DOID:5861;9.37e-99;1!DOID:6496;9.37e-99;1!DOID:201;7.67e-18;6!DOID:0060100;7.67e-18;6!DOID:3119;2.00e-08;14 | |ontology_enrichment_celltype_v019_2=CL:0000058,7.67e-18,6;CL:0000138,7.67e-18,6;CL:0000153,2.19e-12,9;CL:0000447,2.19e-12,9;CL:0000327,5.55e-08,15 | ||
|ontology_enrichment_uberon=UBERON:0002418;4.27e-34;3!UBERON:0004755;4.27e-34;3!UBERON:0001474;7.18e-07;18 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;9.37e-99;1!DOID:4549;9.37e-99;1!DOID:5861;9.37e-99;1!DOID:6496;9.37e-99;1!DOID:201;7.67e-18;6!DOID:0060100;7.67e-18;6!DOID:3119;2.00e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.37e-99,1;DOID:4549,9.37e-99,1;DOID:5861,9.37e-99,1;DOID:6496,9.37e-99,1;DOID:201,7.67e-18,6;DOID:0060100,7.67e-18,6;DOID:3119,2.00e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.37e-18!82;UBERON:0005743!1.67e-17!86;UBERON:0001049!9.24e-17!57;UBERON:0005068!9.24e-17!57;UBERON:0006241!9.24e-17!57;UBERON:0007135!9.24e-17!57;UBERON:0007023!2.25e-16!115;UBERON:0000073!2.16e-15!94;UBERON:0001016!2.16e-15!94;UBERON:0003075!3.12e-14!86;UBERON:0007284!3.12e-14!86;UBERON:0002780!5.12e-14!41;UBERON:0001890!5.12e-14!41;UBERON:0006240!5.12e-14!41;UBERON:0002616!5.24e-14!59;UBERON:0003080!1.26e-13!42;UBERON:0002346!2.12e-13!90;UBERON:0000955!7.79e-13!69;UBERON:0006238!7.79e-13!69;UBERON:0001869!1.33e-10!32;UBERON:0002619!2.35e-10!22;UBERON:0001893!6.90e-10!34;UBERON:0002020!6.98e-10!34;UBERON:0003528!6.98e-10!34;UBERON:0002360!3.68e-09!2;UBERON:0000094!3.68e-09!2;UBERON:0007645!3.68e-09!2;UBERON:0000956!5.19e-09!25;UBERON:0000203!5.19e-09!25;UBERON:0001950!1.04e-08!20;UBERON:0003056!1.35e-08!61;UBERON:0002791!2.72e-08!33;UBERON:0004121!3.80e-08!169;UBERON:0000153!6.75e-08!129;UBERON:0007811!6.75e-08!129;UBERON:0000924!7.66e-08!173;UBERON:0006601!7.66e-08!173;UBERON:0000033!1.79e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;4.27e-34;3!UBERON:0004755;4.27e-34;3!UBERON:0001474;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,4.27e-34,3;UBERON:0004755,4.27e-34,3 | |||
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| ||
|short_description=p30@HDAC9 | |short_description=p30@HDAC9 | ||
}} | }} |
Latest revision as of 14:17, 17 September 2015
Short description: | p30@HDAC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_HDAC9_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -146bp_to_ENST00000406072_5end |
EntrezGene: | HDAC9 |
HGNC: | 14065 |
UniProt: | B5MCF1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.67e-18 | 6 |
chondrocyte | 7.67e-18 | 6 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 4.27e-34 | 3 |
skeletal tissue | 4.27e-34 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.37e-99 | 1 |
extraosseous chondrosarcoma | 9.37e-99 | 1 |
myxoid chondrosarcoma | 9.37e-99 | 1 |
extraskeletal myxoid chondrosarcoma | 9.37e-99 | 1 |
connective tissue cancer | 7.67e-18 | 6 |
musculoskeletal system cancer | 7.67e-18 | 6 |
gastrointestinal system cancer | 2.00e-08 | 14 |