FFCP PHASE1:Hg19::chr11:3147868..3147894,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:3147868..3147894,-
|short_description=p3@OSBPL5
|description=CAGE_peak_3_at_OSBPL5_5end
|association_with_transcript=0bp_to_ENST00000477622_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114879 | |EntrezGene=114879 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16392 | |HGNC=16392 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000477622_5end | |||
|cluster_id=chr11:3147868..3147894,- | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_3_at_OSBPL5_5end | |||
|id=chr11:3147868..3147894,- | |||
|ontology_enrichment_celltype=CL:0002368!2.45e-11!13;CL:0000066!2.49e-10!254;CL:0002139!4.77e-08!24;CL:0000115!1.05e-07!35;CL:0002202!1.46e-07!9;CL:0002632!1.46e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002368;5.67e-16;13!CL:0002202;5.99e-15;9!CL:0002632;5.99e-15;9!CL:0002327;7.46e-12;4!CL:0002328;1.79e-09;3!CL:0000307;3.23e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.20e-16,253;CL:0002368,5.34e-16,13;CL:0002202,7.52e-15,9;CL:0002632,7.52e-15,9;CL:0002327,8.14e-12,4;CL:0002328,1.79e-09,3;CL:0000068,4.29e-09,3;CL:0000069,4.29e-09,3;CL:0000307,4.29e-09,3;CL:0000377,4.29e-09,3;CL:0002076,7.97e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.27e-15;29!CL:0000377;3.23e-09;3!UBERON:0006595;8.47e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.42e-12,106;DOID:0050687,3.60e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.33e-14!72;UBERON:0000065!3.64e-14!53;UBERON:0001737!4.37e-14!9;UBERON:0004921!6.54e-14!129;UBERON:0004185!6.54e-14!129;UBERON:0000077!2.82e-12!130;UBERON:0001041!2.94e-12!98;UBERON:0001557!8.03e-12!19;UBERON:0000072!1.37e-11!46;UBERON:0004119!1.45e-11!169;UBERON:0000925!1.45e-11!169;UBERON:0006595!1.45e-11!169;UBERON:0001007!7.59e-11!155;UBERON:0001555!7.59e-11!155;UBERON:0007026!7.59e-11!155;UBERON:0008947!1.07e-10!38;UBERON:0003258!1.07e-10!38;UBERON:0000464!1.17e-08!104;UBERON:0001044!2.45e-08!6;UBERON:0003293!2.45e-08!6;UBERON:0003294!2.45e-08!6;UBERON:0010047!2.45e-08!6;UBERON:0000167!2.45e-08!6;UBERON:0007023!5.93e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.04e-27;9!UBERON:0001557;2.04e-27;9!UBERON:0000072;1.79e-21;37!UBERON:0000065;7.66e-19;44!UBERON:0001911;7.46e-12;4!UBERON:0001044;3.96e-11;6!UBERON:0003293;3.96e-11;6!UBERON:0003294;3.96e-11;6!UBERON:0010047;3.96e-11;6!UBERON:0003408;3.96e-11;6!UBERON:0000167;3.96e-11;6!UBERON:0007196;6.87e-11;15!UBERON:0001558;6.87e-11;15!UBERON:0001004;5.47e-10;65!UBERON:0004815;1.79e-09;3!UBERON:0002031;1.79e-09;3!UBERON:0002365;8.92e-07;31!UBERON:0002330;8.92e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.05e-27,9;UBERON:0008947,1.11e-23,38;UBERON:0003258,1.11e-23,38;UBERON:0001004,1.23e-19,74;UBERON:0000065,1.18e-18,54;UBERON:0001041,1.81e-18,87;UBERON:0000072,3.98e-18,47;UBERON:0004921,4.51e-16,118;UBERON:0001007,1.73e-13,145;UBERON:0001555,1.73e-13,145;UBERON:0007026,1.73e-13,145;UBERON:0004119,2.76e-13,160;UBERON:0000925,2.76e-13,160;UBERON:0006595,2.76e-13,160;UBERON:0001557,6.58e-12,19;UBERON:0001911,8.14e-12,4;UBERON:0005333,8.14e-12,4;UBERON:0008425,8.14e-12,4;UBERON:0005311,8.14e-12,4;UBERON:0001044,2.60e-11,6;UBERON:0003293,2.60e-11,6;UBERON:0003294,2.60e-11,6;UBERON:0010047,2.60e-11,6;UBERON:0000167,2.60e-11,6;UBERON:0001048,7.26e-11,160;UBERON:0007196,8.08e-11,15;UBERON:0001558,8.08e-11,15;UBERON:0004815,1.79e-09,3;UBERON:0002031,1.79e-09,3;UBERON:0005153,3.75e-07,37;UBERON:0002365,5.90e-07,31;UBERON:0002330,5.90e-07,31 | |||
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| ||
|short_description=p3@OSBPL5 | |||
}} | }} |
Latest revision as of 14:33, 17 September 2015
Short description: | p3@OSBPL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_OSBPL5_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 0bp_to_ENST00000477622_5end |
EntrezGene: | OSBPL5 |
HGNC: | 16392 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.20e-16 | 253 |
respiratory epithelial cell | 5.34e-16 | 13 |
epithelial cell of tracheobronchial tree | 7.52e-15 | 9 |
epithelial cell of lower respiratory tract | 7.52e-15 | 9 |
mammary gland epithelial cell | 8.14e-12 | 4 |
bronchial epithelial cell | 1.79e-09 | 3 |
duct epithelial cell | 4.29e-09 | 3 |
branched duct epithelial cell | 4.29e-09 | 3 |
tracheal epithelial cell | 4.29e-09 | 3 |
tracheoblast | 4.29e-09 | 3 |
endo-epithelial cell | 7.97e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.05e-27 | 9 |
respiratory primordium | 1.11e-23 | 38 |
endoderm of foregut | 1.11e-23 | 38 |
respiratory system | 1.23e-19 | 74 |
respiratory tract | 1.18e-18 | 54 |
foregut | 1.81e-18 | 87 |
segment of respiratory tract | 3.98e-18 | 47 |
subdivision of digestive tract | 4.51e-16 | 118 |
digestive system | 1.73e-13 | 145 |
digestive tract | 1.73e-13 | 145 |
primitive gut | 1.73e-13 | 145 |
endoderm-derived structure | 2.76e-13 | 160 |
endoderm | 2.76e-13 | 160 |
presumptive endoderm | 2.76e-13 | 160 |
upper respiratory tract | 6.58e-12 | 19 |
mammary gland | 8.14e-12 | 4 |
mammary bud | 8.14e-12 | 4 |
mammary ridge | 8.14e-12 | 4 |
mammary placode | 8.14e-12 | 4 |
saliva-secreting gland | 2.60e-11 | 6 |
gland of oral region | 2.60e-11 | 6 |
gland of foregut | 2.60e-11 | 6 |
oral gland | 2.60e-11 | 6 |
oral cavity | 2.60e-11 | 6 |
primordium | 7.26e-11 | 160 |
tracheobronchial tree | 8.08e-11 | 15 |
lower respiratory tract | 8.08e-11 | 15 |
lower respiratory tract epithelium | 1.79e-09 | 3 |
epithelium of bronchus | 1.79e-09 | 3 |
epithelial bud | 3.75e-07 | 37 |
exocrine gland | 5.90e-07 | 31 |
exocrine system | 5.90e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.42e-12 | 106 |
cell type cancer | 3.60e-07 | 143 |